Zingiber officinale (ginger): 122009414
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Entry
122009414 CDS
T08725
Name
(RefSeq) KH domain-containing protein At1g09660/At1g09670-like isoform X1
KO
K14945
protein quaking
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122009414
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122009414
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
122009414
NCBI-ProteinID:
XP_042421489
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Position
8A:69324560..69330268
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AA seq
289 aa
AA seq
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MDERIPSPAYFQYSPSGVHSSPSPHHSIRSPATSERERYLTELLAERQKMIPFMQVLPFC
HRLLNLEIMRASGLVPNHSFVDSERMDHGSPLRLGEPMDLEGWSGMQTEENGYLNRVGTI
QTSNIGWNGITRVNTSPIVKKIVRLDVPVDKYPNYNFVGRLLGPRGNSLKRVEATTQCRV
YIRGRGSVKDLVKEEKLRDKPGYEHLNEPLHVLVEAEFTADVVDGRLDQAVTILEDLLKP
VDESVDYYKKQQLRELAILNGTLREESPQLSPSLSPFNSTGMKRAKTGR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagaatcccttctcctgcttacttccagtactcgccttccggtgtccactca
tctccttccccgcaccactccatcaggtcgcctgcgacttcggaaagagagagatatttg
actgaattactggctgagaggcagaaaatgataccatttatgcaagtccttcccttctgc
cataggcttttaaacctagaaattatgagggcttctggtttggtgcctaatcattctttt
gttgattctgagagaatggatcatggttctccactaagattaggtgaaccaatggatcta
gagggatggtcaggaatgcagacagaggaaaatgggtacctcaacagagttgggactatc
caaacatcaaatataggctggaatggaattactagagttaacacaagcccaattgtgaag
aaaattgtgaggctagatgtccctgtcgacaagtatcctaattacaactttgttggtcgc
ttgttgggacctcgagggaactccttgaaaagagttgaagctacaactcaatgcagagta
tatatccgaggtagaggctccgtgaaggatttggtgaaggaggaaaagttaagagataaa
cctggatacgagcacctgaatgagccattacatgttcttgtagaggccgaattcacggct
gatgtagtcgacggtcgtttggatcaagctgtgacgatactggaagacctcttgaagcca
gtggatgagtctgtggactactacaagaagcaacagctgagggaattagccattctgaac
ggaactctccgagaagaaagccctcaattgagcccgagcttgtctccgttcaatagcacg
ggcatgaaacgagccaaaacaggacggtga
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