Zingiber officinale (ginger): 122009427
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Entry
122009427 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122009427
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122009427
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122009427
03036 Chromosome and associated proteins [BR:
zof03036
]
122009427
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122009427
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122009427
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122009427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
122009427
NCBI-ProteinID:
XP_042421516
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All DBs
Position
8A:complement(69636678..69639885)
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AA seq
512 aa
AA seq
DB search
MIKQIFRRIPRKQSKSGDKRDLAAGASPSSATSTSSRDGDLSNNRVTILPPGQDSELVHL
TQQNHAGMRNGGLSIMPYEALPSFKDVSSSERQRLFIRKVNLCCVVFDFTDSTKSLKEKE
IKRQTLQDLVDYVTSASGKFPENVMQEIIKMVSLNLFRTLSSPPHEYKVLQGFDLEDDEP
VMDPAWPHLHLVYDFFLKFLQSPETDAKLAKRYIDHSFVLKLIDLVDSEDVREREYLKTI
LHRIYGKFMVYRPFIRKAINNIFYQFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKL
FLVRALIPLHKPKCMGIYHQQLSYCITQFIEKDCKLADSVIRGLLKFWPITNSSKEVMFL
GELEEVLDATQLPEFQRCMVPLFHQIARCLNSPHFQVAERALFLWNNDHIENLIKQNVKV
LLPIIFPALERNATSHWNPAVQSLTLNVRKIFADNDPDLFTECLKRFEEDELKSKEIQSK
RESTWKRLEEIAATKAASNEPVLIPRIVHRPI
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgattaagcaaattttccgccggatccctcgcaagcagtccaagtcaggtgataaacga
gatttggctgcaggcgctagcccatcatcagcaacttcgactagttcacgagatggggat
ttgtcaaacaacagggtcacaattctccctcctggtcaggattctgagctagttcatcta
actcagcagaaccatgctggaatgcgaaatggtggtttgtctatcatgccctatgaagca
ctgccgagcttcaaagatgtatcgagctccgagaggcagaggttattcatcagaaaggtg
aatttgtgttgtgtggtattcgacttcacagactccacaaagagcttgaaagagaaggaa
ataaaaagacagactcttcaagatctagttgattatgtgacctcagccagtggcaagttt
ccagagaatgttatgcaagagatcatcaagatggtgtccttaaacttgtttaggaccctc
agttccccacctcatgagtacaaggttctacaaggctttgatttggaggatgatgaacct
gtaatggaccctgcatggccgcacctccatcttgtttatgacttctttttgaagttcctt
caatcacctgagacagatgccaagctggcaaaaagatatattgatcattcctttgttctt
aagctgatcgacctagttgactctgaggacgtcagagagagggagtatttaaagacaatt
ctacaccgtatctatggaaaatttatggtgtatcgaccatttataagaaaagctattaat
aatatattctatcaatttatcttcgagactgaaaaacataatgggattgcagagctgcta
gaggtattgggaagtattatcaatggctttgcattgcctttaaaggaagagcataaattg
ttccttgttcgggctttaatcccactccataaaccaaaatgtatggggatataccatcag
caattgtcatactgcataacccaatttatagaaaaagattgcaagcttgcagatagtgtc
ataaggggcttgttgaaattttggcctatcaccaacagttcaaaggaagttatgttcttg
ggagagttagaagaggtcttggatgcaactcaacttccagaattccagcgatgtatggtc
ccactattccaccagatagcccgctgcttgaatagtcctcattttcaggtagccgagagg
gcattgttcctatggaacaacgatcacatcgagaacctgatcaaacaaaatgtcaaggta
ctattacccataatctttccagcactcgaaagaaacgccacaagtcactggaacccagct
gttcagagcttgacgttaaatgttcgaaagatctttgctgataacgatcccgacctattc
actgagtgcctgaagagattcgaggaagatgaactcaaaagcaaggagatccaatcaaaa
cgcgaatcaacatggaaacgtttggaggaaattgctgctactaaagccgcgagcaacgag
cctgtgcttattccgcgaatagtacatcgtccaatttaa
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