KEGG   Zingiber officinale (ginger): 122009484
Entry
122009484         CDS       T08725                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 26-like
  KO
K11858  ubiquitin carboxyl-terminal hydrolase 48 [EC:3.4.19.12]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:zof01002]
    122009484
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    122009484
Enzymes [BR:zof01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     122009484
Peptidases and inhibitors [BR:zof01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   122009484
Ubiquitin system [BR:zof04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    122009484
SSDB
Motif
Pfam: UCH DUSP UCH_1 ubiquitin Croc_4 SOTI
Other DBs
NCBI-GeneID: 122009484
NCBI-ProteinID: XP_042421602
LinkDB
Position
8A:71379954..71389541
AA seq 1104 aa
MGGPNSCNDTERKIIDDSSDPSSQFSCQTEIFSTASRPDTRHKNKRKKNEDSSYSATETL
RKIHLTGEITRDDIIQLYSITKPICQGCRGNSKESPNCFCGLIPPSNGTKKTGLWQRMSE
IISSLGPDPCKDLRDSTDTPAGLTNLGATCYANSILQCLYMNTSFRSCIFSIEPDFFKQH
PVLDQLGRLFVQLHSSKMSFIDSAPFIKTLELDDGVQQDSHEFLTLFLSLLERYLSHSKV
ANARTAVQDLFRGSVSHVTRCSMCGKDSQASSKVEDFYELELNIKGLSNLDESLDDYLSL
EVLDGENQYFCCSCSKRVDATRCIKLCSLPQVLNFQLKRYVFLPKTTTKKKITSAFGFTR
WLDMGKRLSNPPQSGLIYELSAILIHKGSAANSGHYVAHIKDENSGQWWEFDDEHVSNLG
HHPFGETSKANVKSHLKNQLVNSTPASCATSGFNAPMQEEVFSSSDAYMLMYNLRTDKEN
KDDLRKIVMGDHDSKSSYLPSHLDEEMGTLNTSYEKSCAEYLKRKETEQSRITERRQEVK
LVLSKAPVDPGGASYFWISMEWLRQWTDTIIPPCIDNSPIQCAHGKVPISKVTSMKRLSD
AAWQMLLSKYGGGPTLSNDDICIDCLRDEAKTAVCADDYRDKKASLRQLAEAALAGKYLD
GRLYFVSRPWLLQWLRRKNVDFPSDTDAGPTASLRCSHGNLLPEQAPAAKRVLVPERLWL
FFLEFSASSKSDGSLGFSTFSSESEPCETCSKELKNVACLEDDLRASKLKQRQNHEKLIM
GKGFPLFPGLKYYLVPSSWLAEWKAYLIATGKNISSCEKPENLEMIIDSLICQKHSHLLE
RPLELVYKRGVISQKVSTTKGLVLIPETDWSLFCEEWNVPEDKGISAEIVVASSLSKLDG
SCENIPIFVEGTDEHMNEANDGTDVGKLLIRTYPQTCEVCIGERESSELMHKLCYSDEVI
CVHLVRGKEPPKYLIEASTSVSEPDRRASKRSRRTSSGNSVNLRVSGSTSIYQLKMMIWE
AFGVVKENQKLHKGSTEIDDESATLSDKSIFPGDVLWVTDSEIYANRDIADELSEHKIEP
GQSEQGFRGTLLTSDVSVLNFQEI
NT seq 3315 nt   +upstreamnt  +downstreamnt
atgggtggaccaaattcttgcaatgatactgagaggaaaataattgatgacagtagtgac
ccatcctctcaattcagttgtcaaactgaaattttcagtacagcaagtagaccagacact
cgccacaaaaataagaggaagaaaaatgaagacagcagttactcagccactgagacactc
aggaaaatacacttaactggtgagattacaagagatgatataatacagctttattccatt
acaaaacctatttgtcaaggttgtcgtggaaattctaaagagtcccctaattgcttttgc
gggctgattccaccatctaatggcacaaaaaagactggattgtggcagaggatgtctgaa
ataattagttctcttggtccagatccttgcaaggatcttcgtgactcaacagatactcca
gctggtcttactaatttgggtgccacctgctacgcgaacagcatacttcagtgcctttat
atgaacacatcatttcgttcttgcatattctctattgaacctgatttttttaagcaacat
cctgtcttggatcagcttggaaggttgtttgtacagttacactccagcaaaatgtcattt
attgactcagcaccgtttattaagacattggagctggacgatggtgttcaacaggatagc
catgaatttcttaccttatttctatctttattggaaagatatttaagtcattcaaaggtt
gcaaatgctagaactgccgtgcaggatttatttcgtgggagtgtttcacatgtaacacgg
tgctcaatgtgtggaaaagactctcaagcatcttcaaaggtggaggatttttatgagctt
gagttgaatatcaaaggtctgagcaatctagatgaaagtttggatgactatctaagctta
gaagtattagatggggaaaatcaatatttctgctgttcatgtagcaagagagttgatgct
acacggtgcataaaactttgttcacttcctcaggttcttaatttccagttaaagcgttat
gtttttctccccaagacgactaccaagaaaaagataacttcagcttttggttttacgaga
tggttggacatggggaaaaggttatcaaatcctccacagtcaggcttgatttatgagttg
tcagcaattctgattcacaagggttctgctgctaatagtggacattatgtggcccatatt
aaggatgaaaacagtggacaatggtgggaattcgacgatgagcatgtgtccaatttgggc
catcacccttttggagaaacctcaaaggcaaatgttaaatctcacttgaagaatcaattg
gttaattctacacctgcttcctgtgccacctcaggcttcaatgcccctatgcaagaagaa
gtcttttcatcctccgatgcatacatgttaatgtataatcttagaactgataaggagaat
aaagatgatttgagaaaaatagttatgggagatcatgactcaaaaagcagttatcttcct
tctcaccttgatgaagagatgggaactttaaatacttcttatgaaaaatcttgtgctgaa
tatctgaagagaaaagaaactgagcagtctcgtataactgaacggagacaagaagtgaag
ttggttctttcaaaagctcctgttgaccctggtggcgcttcatatttttggatctctatg
gagtggcttcgtcagtggactgatactatcattcctccttgcattgacaacagcccaatt
cagtgtgcacatggtaaagttcctatatcaaaagtaacctccatgaagcggttgtcagat
gcagcttggcagatgctgttgtctaaatacggaggggggcctactttgagcaatgatgat
atttgcattgattgccttagagatgaggcaaaaactgcagtctgtgcagatgattaccgt
gataagaaggcttccttaaggcaacttgctgaagctgcccttgctggaaagtatctggat
ggtcgtttgtattttgtatctaggccatggttgctacagtggttgcgtaggaaaaatgtt
gattttccttctgacactgatgctggaccaactgcttctcttcgatgttcccatggaaac
cttctcccagaacaagctcctgcagcaaagcgtgtgctggttcctgagaggctctggcta
tttttccttgaattttctgcttcgtccaaatctgatggttcattaggtttttcaacattc
tcttctgaatctgaaccatgcgaaacttgtagcaaggaattaaagaatgttgcatgcttg
gaggatgatcttagagcatccaagcttaagcaacgtcaaaatcatgaaaaattaattatg
ggcaaaggttttccactttttcctggtctaaagtattacttggtcccctcatcatggctc
gcagaatggaaggcttatctgatagcaactgggaagaacatttcttcatgtgaaaaacct
gagaatttggaaatgataattgattcacttatatgtcagaagcattcacatttactggaa
aggcctcttgaactagtttacaaacgcggtgtcatctctcagaaagtatctactacaaaa
gggttggtactcattccagagactgattggtcgctgttttgtgaagaatggaatgttcca
gaagacaaaggcatatctgctgaaattgtagttgccagcagtctcagtaagttggatgga
tcttgtgaaaacattcctatttttgtggagggtacagatgaacacatgaatgaagcaaat
gacggcacagatgttggaaaattgcttattagaacttatccacagacatgcgaagtttgt
attggagaaagagaaagcagtgaattaatgcacaagctttgttattctgatgaggttatt
tgtgtgcatcttgtccgtggtaaggaacctccaaaatacctcatagaagcttcaacatct
gtttctgagccagaccggcgtgcttccaagcgctccagaagaacgtcttctggcaattca
gtcaatttaagagtttctggttccacctccatctaccagttgaaaatgatgatttgggaa
gcctttggggttgttaaggagaatcaaaagcttcacaaaggttcaaccgagatagatgat
gaatcagctaccttaagtgacaagagcatttttccaggtgatgttctatgggtcaccgat
tcagagatttatgcaaatcgggatattgctgatgaactttcagaacataaaattgaaccc
ggacaatctgagcaaggcttccgtgggacacttttgacgtcggatgtctcagttctcaat
tttcaggaaatttga

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