Zingiber officinale (ginger): 122009484
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Entry
122009484 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 26-like
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122009484
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122009484
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122009484
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122009484
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122009484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
Croc_4
SOTI
Motif
Other DBs
NCBI-GeneID:
122009484
NCBI-ProteinID:
XP_042421602
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Position
8A:71379954..71389541
Genome browser
AA seq
1104 aa
AA seq
DB search
MGGPNSCNDTERKIIDDSSDPSSQFSCQTEIFSTASRPDTRHKNKRKKNEDSSYSATETL
RKIHLTGEITRDDIIQLYSITKPICQGCRGNSKESPNCFCGLIPPSNGTKKTGLWQRMSE
IISSLGPDPCKDLRDSTDTPAGLTNLGATCYANSILQCLYMNTSFRSCIFSIEPDFFKQH
PVLDQLGRLFVQLHSSKMSFIDSAPFIKTLELDDGVQQDSHEFLTLFLSLLERYLSHSKV
ANARTAVQDLFRGSVSHVTRCSMCGKDSQASSKVEDFYELELNIKGLSNLDESLDDYLSL
EVLDGENQYFCCSCSKRVDATRCIKLCSLPQVLNFQLKRYVFLPKTTTKKKITSAFGFTR
WLDMGKRLSNPPQSGLIYELSAILIHKGSAANSGHYVAHIKDENSGQWWEFDDEHVSNLG
HHPFGETSKANVKSHLKNQLVNSTPASCATSGFNAPMQEEVFSSSDAYMLMYNLRTDKEN
KDDLRKIVMGDHDSKSSYLPSHLDEEMGTLNTSYEKSCAEYLKRKETEQSRITERRQEVK
LVLSKAPVDPGGASYFWISMEWLRQWTDTIIPPCIDNSPIQCAHGKVPISKVTSMKRLSD
AAWQMLLSKYGGGPTLSNDDICIDCLRDEAKTAVCADDYRDKKASLRQLAEAALAGKYLD
GRLYFVSRPWLLQWLRRKNVDFPSDTDAGPTASLRCSHGNLLPEQAPAAKRVLVPERLWL
FFLEFSASSKSDGSLGFSTFSSESEPCETCSKELKNVACLEDDLRASKLKQRQNHEKLIM
GKGFPLFPGLKYYLVPSSWLAEWKAYLIATGKNISSCEKPENLEMIIDSLICQKHSHLLE
RPLELVYKRGVISQKVSTTKGLVLIPETDWSLFCEEWNVPEDKGISAEIVVASSLSKLDG
SCENIPIFVEGTDEHMNEANDGTDVGKLLIRTYPQTCEVCIGERESSELMHKLCYSDEVI
CVHLVRGKEPPKYLIEASTSVSEPDRRASKRSRRTSSGNSVNLRVSGSTSIYQLKMMIWE
AFGVVKENQKLHKGSTEIDDESATLSDKSIFPGDVLWVTDSEIYANRDIADELSEHKIEP
GQSEQGFRGTLLTSDVSVLNFQEI
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaccaaattcttgcaatgatactgagaggaaaataattgatgacagtagtgac
ccatcctctcaattcagttgtcaaactgaaattttcagtacagcaagtagaccagacact
cgccacaaaaataagaggaagaaaaatgaagacagcagttactcagccactgagacactc
aggaaaatacacttaactggtgagattacaagagatgatataatacagctttattccatt
acaaaacctatttgtcaaggttgtcgtggaaattctaaagagtcccctaattgcttttgc
gggctgattccaccatctaatggcacaaaaaagactggattgtggcagaggatgtctgaa
ataattagttctcttggtccagatccttgcaaggatcttcgtgactcaacagatactcca
gctggtcttactaatttgggtgccacctgctacgcgaacagcatacttcagtgcctttat
atgaacacatcatttcgttcttgcatattctctattgaacctgatttttttaagcaacat
cctgtcttggatcagcttggaaggttgtttgtacagttacactccagcaaaatgtcattt
attgactcagcaccgtttattaagacattggagctggacgatggtgttcaacaggatagc
catgaatttcttaccttatttctatctttattggaaagatatttaagtcattcaaaggtt
gcaaatgctagaactgccgtgcaggatttatttcgtgggagtgtttcacatgtaacacgg
tgctcaatgtgtggaaaagactctcaagcatcttcaaaggtggaggatttttatgagctt
gagttgaatatcaaaggtctgagcaatctagatgaaagtttggatgactatctaagctta
gaagtattagatggggaaaatcaatatttctgctgttcatgtagcaagagagttgatgct
acacggtgcataaaactttgttcacttcctcaggttcttaatttccagttaaagcgttat
gtttttctccccaagacgactaccaagaaaaagataacttcagcttttggttttacgaga
tggttggacatggggaaaaggttatcaaatcctccacagtcaggcttgatttatgagttg
tcagcaattctgattcacaagggttctgctgctaatagtggacattatgtggcccatatt
aaggatgaaaacagtggacaatggtgggaattcgacgatgagcatgtgtccaatttgggc
catcacccttttggagaaacctcaaaggcaaatgttaaatctcacttgaagaatcaattg
gttaattctacacctgcttcctgtgccacctcaggcttcaatgcccctatgcaagaagaa
gtcttttcatcctccgatgcatacatgttaatgtataatcttagaactgataaggagaat
aaagatgatttgagaaaaatagttatgggagatcatgactcaaaaagcagttatcttcct
tctcaccttgatgaagagatgggaactttaaatacttcttatgaaaaatcttgtgctgaa
tatctgaagagaaaagaaactgagcagtctcgtataactgaacggagacaagaagtgaag
ttggttctttcaaaagctcctgttgaccctggtggcgcttcatatttttggatctctatg
gagtggcttcgtcagtggactgatactatcattcctccttgcattgacaacagcccaatt
cagtgtgcacatggtaaagttcctatatcaaaagtaacctccatgaagcggttgtcagat
gcagcttggcagatgctgttgtctaaatacggaggggggcctactttgagcaatgatgat
atttgcattgattgccttagagatgaggcaaaaactgcagtctgtgcagatgattaccgt
gataagaaggcttccttaaggcaacttgctgaagctgcccttgctggaaagtatctggat
ggtcgtttgtattttgtatctaggccatggttgctacagtggttgcgtaggaaaaatgtt
gattttccttctgacactgatgctggaccaactgcttctcttcgatgttcccatggaaac
cttctcccagaacaagctcctgcagcaaagcgtgtgctggttcctgagaggctctggcta
tttttccttgaattttctgcttcgtccaaatctgatggttcattaggtttttcaacattc
tcttctgaatctgaaccatgcgaaacttgtagcaaggaattaaagaatgttgcatgcttg
gaggatgatcttagagcatccaagcttaagcaacgtcaaaatcatgaaaaattaattatg
ggcaaaggttttccactttttcctggtctaaagtattacttggtcccctcatcatggctc
gcagaatggaaggcttatctgatagcaactgggaagaacatttcttcatgtgaaaaacct
gagaatttggaaatgataattgattcacttatatgtcagaagcattcacatttactggaa
aggcctcttgaactagtttacaaacgcggtgtcatctctcagaaagtatctactacaaaa
gggttggtactcattccagagactgattggtcgctgttttgtgaagaatggaatgttcca
gaagacaaaggcatatctgctgaaattgtagttgccagcagtctcagtaagttggatgga
tcttgtgaaaacattcctatttttgtggagggtacagatgaacacatgaatgaagcaaat
gacggcacagatgttggaaaattgcttattagaacttatccacagacatgcgaagtttgt
attggagaaagagaaagcagtgaattaatgcacaagctttgttattctgatgaggttatt
tgtgtgcatcttgtccgtggtaaggaacctccaaaatacctcatagaagcttcaacatct
gtttctgagccagaccggcgtgcttccaagcgctccagaagaacgtcttctggcaattca
gtcaatttaagagtttctggttccacctccatctaccagttgaaaatgatgatttgggaa
gcctttggggttgttaaggagaatcaaaagcttcacaaaggttcaaccgagatagatgat
gaatcagctaccttaagtgacaagagcatttttccaggtgatgttctatgggtcaccgat
tcagagatttatgcaaatcgggatattgctgatgaactttcagaacataaaattgaaccc
ggacaatctgagcaaggcttccgtgggacacttttgacgtcggatgtctcagttctcaat
tttcaggaaatttga
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