Zingiber officinale (ginger): 122009603
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Entry
122009603 CDS
T08725
Name
(RefSeq) cullin-1-like
KO
K03347
cullin 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122009603
04120 Ubiquitin mediated proteolysis
122009603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122009603
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
122009603
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
122009603
NCBI-ProteinID:
XP_042421758
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Position
1A:complement(121664461..121669706)
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AA seq
749 aa
AA seq
DB search
MKRKRAVRNKKPKPILFGEGWEVIEQGVTKMKRILEGLPEPPFTSEEYMKIYTTIHNMCI
QSSQYDYTEKMYIKYKEVIKEYITSVVLPSLKDKHDEFLLRELVIRWSNHKVMTKWLSRF
FSYLSRFFIKRNSLPSLDEVAFTSFRDQVYKKTKGKVKDAAISLIDQERCGEQIDRGLLK
NVIEIFVEIGMGKMNYYKNDFEEEMLKETAAYYSRKASNWILVESFPDYMLKVEECLRRE
KDRVVHYLHVTSEPKLIEQVRHEVLCVYSSQLLENEKSGCCVLIQEHKVDDLSRMYKLFS
KIDDSLCRISQIYKKHVTVQGTTLVKKADDVASNKEAEKRVVVGLQEQTFVREVIELHDK
NMPLVNDCFQNHTLFHKGLKEAFEIFLNKTVAGSSTAELLVNYCDNILKKGGSEKYSDEA
IEQILEKAVNLLGYIYDKDLFVEFYRKKLARRLLFDKSANEDHERSILTKLKQQNGAHFT
SKLEGMVTDMILTRETQADFKEYLQYNPHTNPGIDLSVTVLTTGFWPSYRSSDFHLPFEM
TKCIQAFKEFYPTKTNSRKLTWIYSLGTCNITAKFELQTIELIVTTYQAAVLLLFNDSDR
LSYSEIMSQLNLADDDVVRLLQSLCCLKYKILNKEPNINSISSDDVFAFNSKFTNKMRRI
RIPLPIVDEKKKILEVVDKDRKYVVDACLIRIMKSRKVLNHQQLITECVEQLKVFKPDLK
LIKKRIEDLINREYLERDSENLNLYRYIT
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaaaagggcggtgcgtaataagaagccgaagccgatccttttcggcgaaggg
tgggaggtcatcgagcaaggcgtcaccaagatgaagaggatcttggaagggcttcccgaa
ccacctttcacatccgaggaatacatgaagatctacacaacaatccacaatatgtgtatc
caaagttctcagtacgattacacggaaaaaatgtacataaagtacaaggaagtgatcaag
gagtacataacttccgtggtattgccctctttgaaggacaagcatgatgagtttttgtta
agggaactggtcataagatggtcaaatcataaagttatgaccaaatggctttcacgtttt
ttttcgtaccttagtcgctttttcatcaagcggaactcacttccatcacttgatgaagtt
gcatttacaagttttcgagaccaggtttataagaagactaaaggaaaagttaaagatgct
gccatttctttgattgatcaagagcgctgtggtgaacaaattgataggggtctgttgaag
aatgttattgaaatttttgttgaaattggaatgggcaagatgaattattataaaaatgat
tttgaagaagaaatgcttaaagaaacagcagcctattactctagaaaagcttcaaattgg
attctcgtcgaatcattcccagattacatgttaaaggttgaggagtgcttaaggagggag
aaggatagggtcgttcattatttgcatgttactagcgaaccaaaattgatagagcaagtg
cgtcatgaggttctatgtgtttattcaagccaacttttggaaaatgaaaagtctggttgc
tgtgtcttaattcaagaacacaaggtggatgatctctcacggatgtacaagcttttttca
aagatagacgacagtctatgtcgtatctctcaaatttataagaagcatgtgactgttcag
ggtaccactttagttaaaaaagcagatgatgttgcaagtaataaggaggcagagaaaagg
gttgttgttggcttgcaagaacagacttttgttagggaagttattgaacttcatgacaag
aacatgccactcgtgaatgattgtttccaaaatcatacccttttccataagggactcaaa
gaggcatttgagatttttctcaataagactgttgctggtagctcgactgctgagttactg
gttaactattgtgataatattcttaagaagggtggaagtgagaaatatagtgatgaagca
attgaacaaatacttgaaaaggctgtgaatttgcttggttatatctatgacaaagattta
tttgttgagttctataggaaaaagcttgctaggaggttgttattcgacaaaagtgctaat
gaggaccatgagagaagcatcttaacaaaactaaagcagcaaaatggtgcacattttacc
tcaaagttggagggaatggtaactgatatgatcctcactagagaaacacaagctgatttt
aaggaatatcttcaatataatccacatacaaatccagggatagatttatcagttactgtt
ttgacaactggattctggccatcttatagatcatctgatttccaccttccttttgaaatg
actaaatgtatacaagctttcaaggagttctatccgacaaaaacaaacagcagaaagctc
acatggatatattctttggggacatgcaatattacagccaagttcgaattgcaaactata
gagcttattgtgacaacatatcaggctgcagttcttctgctctttaatgactcagatcga
ttaagctactcagagatcatgtctcaacttaatttagccgatgatgatgtagtcagattg
cttcaatccctttgttgcttgaagtataaaattctgaataaagaaccaaatataaattct
atttcttcagatgacgtctttgcgttcaattcaaaattcaccaacaaaatgagaaggatc
aggataccccttccaattgtggatgaaaaaaagaaaatacttgaagtggtggataaggat
agaaaatatgttgttgatgcttgcctgattcgcattatgaaaagccggaaagtattgaat
catcaacagttgattacagaatgtgtcgaacaacttaaagtgttcaagcctgacttgaaa
ctaattaagaagcgtattgaagatttgataaatagagaatatctagagagagactcggaa
aacctgaatctgtacagatacattacttga
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