Zingiber officinale (ginger): 122009656
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Entry
122009656 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122009656
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122009656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122009656
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
122009656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
Motif
Other DBs
NCBI-GeneID:
122009656
NCBI-ProteinID:
XP_042421836
LinkDB
All DBs
Position
8A:78288033..78299077
Genome browser
AA seq
1157 aa
AA seq
DB search
MAILKNASRVLRAADDSSPRSASSQDEDAEPSAGIGKVESYVSEASYVDSGMETDECDQL
EVSEPGAQLCQVGNQNFGFPLELFDLPDLSSILSLETWNECLTEEERFVLAEYLPDMDQE
TFAITLKELFSGKNFQFGSPLNTFFSQLKGGLCDPKIIVYRHGLISMQRREHYHCLHRYQ
NSMVRSLVYMKDAFQNCAGYSIQERIQFLNMVKRQRPLERNGDIWFETNSGEGNLHHLYS
RHSSKVARRFPKPSIDIKLREIGMGVEPVIFGKGKTKGVLKVTASKFPTQESFGTSAAHP
SALKYGMSSKSKAKIPKLPFSGKNKYTEYHLESPSRTIHYTSEDQDDMEEEYIIPPKELK
SGHRSIAASCLSRTGKNQKPVKRHSANMYSDEEEPADYSGFSHSRRKNGNVHHTVTIASY
VDESPEHTGEARSFEREFLPSTTDQTQSLMLNRPIRQNKVHEDSISLDYLLKSDDLNTRI
NKWNIKPEYEIEKKHKRMVGKDHSSQQSFYDADYSGDMMDEHMDNMDAISKLKGSNNRTN
RLENTMKFSDSQPDANFETSGLPLKGCNSSSKKPKWKVNGQYPDEPDDPRYLKPNAKQQK
GKRKAVAETDSLAAVNSDQAISKMDAEDVEPKPKLQKKPFALITPTIHTGFSFSIVHLLS
AVRKAMINQTEDSTFNDVHLHNRNYSPMQNIKELNDMCQTENNMHLAHSVENMVNQASLP
SLTFQEIVDRVRSNPGDPCILETQEPLQDLVRGALRVFSSKTAPLGAKGWKPLVCYEKLN
KSWSWTGPISSGLPDDENAEEETSSEAWGIPHKMLVKLVDAFANWLKSGQETLQQIGSLP
PPPTSLLSNLDEKERFKDLRAQKSLNTIGSSSNEVRAYFRREEFLRYSVPDRAFSYTAAD
GRKSIVAPLKRGGGKPTSKARDHFMLKPDRPPHVTILCLVRDAAARLPGSIGTRADVCTL
LRDSQYVVENVSDTQVTQVVSGALDRLHYELDPCVQFDSERKLWVYLHRDREEEDFEDDG
TSSTKKWKRQRKDTADPSDTGIANDVDTGTLAVCGPSTGLDHDHNLNVGTASVGSGDTAD
HLNEDMDVNVENFHPLMDINTISESNGNWNALGLNLLNENRLVCQKNSTDEDYKDETFCQ
ERPIQLNYDHIMNKKLY
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttgaagaatgcatctagggttttgagggcggccgatgattcctcgccccgg
agcgcatcgagccaggacgaggacgcagagccctctgcggggatcggcaaggtggagtct
tatgtttcggaggcttcttatgtggactccggcatggagacggatgagtgtgatcagttg
gaagtcagtgagcccggagctcagttgtgtcaagtggggaaccagaactttggcttcccg
cttgagctcttcgatctccctgacttgagttcgattttatctttggagacgtggaatgag
tgcctcacggaggaggagcggttcgtgctggcggagtaccttccggacatggaccaggag
acgtttgcgattaccctcaaagagctgttttctggaaaaaatttccaattcgggagcccg
ctcaatacttttttcagtcagttgaaaggtgggttatgtgaccctaagatcattgtttat
cgccacggcttgatttccatgcaacggcgtgaacactaccattgcctgcacagatatcag
aattctatggtgaggagtcttgtctacatgaaggatgcatttcaaaattgtgctggttat
tctattcaagaaagaattcagtttctgaatatggtaaagagacagaggcctcttgagagg
aatggggatatttggtttgagacgaattcaggggaaggaaatttgcatcatctctactcg
aggcacagttctaaggtggctcgtcggtttccaaagccttcaattgatatcaagcttcgt
gagattggcatgggtgtggagcctgtgatatttggtaaagggaaaacaaaaggagtttta
aaggttactgcttccaagtttccaacacaggagagttttggaacatcagctgcacatcct
tcagctttgaagtatggaatgtcctcaaaatctaaagcgaaaattccaaagttgcctttc
agtgggaagaataaatatacagaatatcatctggaatctccttcaaggactatacattat
actagtgaagatcaagatgacatggaggaagagtatataattccaccaaaagagttgaaa
tcaggacacagaagtattgcagctagttgtctgtctagaacaggaaagaatcagaaacca
gtgaaaaggcacagtgccaacatgtatagtgatgaagaagagcctgcagactacagtggt
ttcagtcattctcggaggaaaaatggaaatgtacatcatacagtaactattgcttcttat
gttgatgaatcacctgaacatacaggagaggctagaagttttgagagagaatttttacct
tctaccacagatcaaactcaaagtcttatgctgaatcgccccatcaggcaaaacaaggtc
catgaggactcaatttcactggattatctcctgaagtcggatgatttgaacaccagaatt
aataaatggaatatcaagcctgagtatgaaattgagaagaagcacaaaaggatggttggc
aaggatcattcttcacagcagtcattttatgatgctgattacagtggtgatatgatggat
gaacatatggataacatggatgcaatttcaaagttaaaaggcagcaataacagaactaat
agattggagaacaccatgaaattctccgattctcagccggatgctaattttgaaacatca
ggccttcccctaaaaggttgtaattcttcatcaaagaaacctaaatggaaggttaatggt
cagtaccccgatgagccagatgatccccgttatctaaagcccaatgcaaagcagcagaag
ggtaaaaggaaagcagttgctgaaactgactctctggctgcagtaaattcagatcaggca
atatctaaaatggatgcagaagatgtagaacctaagccaaaattacagaagaagccattc
gcccttatcacaccaactattcatactggtttctcgttttccatagtgcatctactttca
gctgtacgaaaggcaatgattaatcagacagaagattccacatttaatgatgttcatctt
cacaacagaaactatagccctatgcaaaatataaaagagctgaacgacatgtgccagaca
gaaaacaatatgcaccttgcccattctgttgagaatatggtaaaccaagctagtttgcct
tctcttacttttcaagagatcgttgatcgagtaagatcaaaccctggagatccatgcatc
cttgaaacacaggaaccacttcaagatttagtccgaggagctttaagggtattttcatct
aagacagcacctttaggagccaagggttggaagcccctagtatgctatgagaagttaaac
aaaagttggtcatggacaggccctatttcttctggtttacctgacgatgaaaatgcagaa
gaggagacttcttcagaagcatggggaattcctcacaagatgcttgtaaagcttgttgat
gcttttgctaattggctcaagagtggccaggagaccttgcagcagattgggagcctccct
ccacctcctacttctttgctttcaaacttggatgagaaggagaggtttaaagatctgaga
gcccaaaagagtctaaacactattggttcaagttcaaatgaggtaagagcatacttccgc
agagaggaatttttaaggtactcagttccagatagggccttttcctacactgctgctgat
ggaagaaaatcaattgttgctccattgaagagaggaggcggaaagccaacatcaaaggca
cgggatcatttcatgcttaaacctgatcggccacctcacgttactattctttgtcttgtt
cgagatgcagctgccaggttgcctggtagtattggaactagggcggatgtttgtactctg
ctgagggactcacaatatgttgttgaaaatgtttctgatacacaggtgactcaagtagtg
agtggggctctagatcgattgcattatgagcttgatccttgtgtacagtttgatagtgaa
agaaaattgtgggtttatctgcatagggatagggaagaggaagattttgaggacgatggc
acctcatcaactaagaaatggaaaaggcagaggaaagatactgcagatccatcagatact
ggaattgctaatgatgttgacactggaaccttggctgtctgcggcccttccactggcctg
gatcatgatcacaatctaaatgttggcacagcatcggttggatcaggagacacagctgat
catcttaatgaagatatggatgtaaatgtagagaacttccatcctctcatggacataaac
actattagtgagagcaatggtaattggaatgctctggggttgaatctattaaatgaaaac
agattggtatgtcaaaagaactccactgatgaggattacaaggatgaaacattttgtcaa
gagaggcccattcaactcaattacgaccacattatgaataaaaaattgtactag
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