Zingiber officinale (ginger): 122009683
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Entry
122009683 CDS
T08725
Name
(RefSeq) DNA (cytosine-5)-methyltransferase CMT3-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00270
Cysteine and methionine metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122009683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122009683
03032 DNA replication proteins [BR:
zof03032
]
122009683
03036 Chromosome and associated proteins [BR:
zof03036
]
122009683
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
zof02048
]
122009683
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122009683
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122009683
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122009683
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122009683
Prokaryotic defense system [BR:
zof02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
122009683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Chromo
BAH
Motif
Other DBs
NCBI-GeneID:
122009683
NCBI-ProteinID:
XP_042421878
LinkDB
All DBs
Position
8A:complement(79800474..79808048)
Genome browser
AA seq
1076 aa
AA seq
DB search
MTAASVEKRDRRVRRAAEASGARATPPSTRSKMRATDAGIDGATAADGSENSARERAAVV
GAANEVAPSAPTTRGKKRATNAEEGRAIPVSPIPLPSFTQLSASHLPEMATASAEKRTRR
TKLDAEANGARATPPTTRGKKRASEAGKDSAIAADVSTNRVMEASVVVGGANQVEPTDPT
TKRKKRVANANGCSARGLDGVKNRVMEIVGEASEVASTDPTLDQSIKKKDICIGDEGYDV
ASDQTSEEAENQEAEEKELKEVVSIKLSPKKRAGYNKTSKENVVLACHFIGEPIPAAEAK
QRWPERYQRKRIYVSGSAKSVDDEPILLARQHYLKAIVDGVTYNLYDDAYVKAGEGEADY
IGHIVEFFQATDNQLYFTAQWFFRAEDTVIKEHAHCHGVKVVHDSRRVFLSKETNDNVLD
CIVSKIQIKRVTPNIDLEAKEKNIPPCDLYYDMSYSLAYSTFENLSNEHAGTDSGSSSTV
SSEDPTNATNQKTPDSEATFGQKNVITLLDLYSGCGAMSTGLCLGASLSDMNLQTCWAVD
FNQYACESLKLNHPETQVRNEKANDFLALLNEWVKLCTKYCVLSDQSFDEEESDFNGLDD
KEHEDSKPPNGEEFEVENLLDICYGDPNNIGKVGLMFKVRWKGYNPSYDTWEPIDGLSNC
EEKIMEFVKSGYKKNILPLPGQVDVICGGPPCQGISGFNRFRNINAPLEDPKNQQMLVFM
DIVNFLKPKYVLMENVVDILKFANGFLGRYALSRLVAMNYQARLGMMVAGCYGLPQFRMR
AFLWGARPTEILPQFPLPTHDVVVRGGTPNEFEQNIVAYNEDQHPQLEKKLLLEDAISDL
PVINNYEDRDEMPYGRPPITEFQKFIRLSRIEALASGSIVERPIAKYPLFDHRPLQLNED
DYQRVCAIPKKKGANFRDLPGVRVGNDNIVEWDPEVERVYLPSGKPLVPDYAMSFIKGKS
PKPFGRLWWDETVPTVVTRAEPHNQVILHPEQDRVLSIRENARLQGFPDYYQLRGSIKER
YIQVGNAVAVPVARALGYALGQAYQGHRNSEPLLILPRHFPVLDPASATIEAEESG
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcgtcggtggagaagcgagatcggcgggttaggcgggcggccgaggccagc
ggtgctcgtgctactccccccagcacccgaagcaagatgcgcgcgactgatgctggcatc
gacggtgccacggctgcagatggaagtgagaatagcgccagggaaagagcggcggtggtc
ggagcggcgaacgaggtagcgccgtcggctccaaccaccagaggaaaaaagcgcgcgacg
aatgcggaggaggggagagcaattcctgtaagtccgatccctcttccgtcgttcacgcag
ttgtcggcctcacaccttcccgaaatggccacggcgtcggcggagaagcgcacgcgacgg
acgaagctggacgccgaggctaacggtgcccgcgccacaccgcccaccactaggggaaag
aagcgtgcctctgaggctggcaaagatagtgccatagctgcagatgtaagcacaaatagg
gtgatggaggcatcggtggtggtcggaggggcaaaccaggtagagccgacggatccaacc
accaaaagaaaaaagagggtggcaaatgcgaacggatgtagcgccaggggcctggatgga
gtcaagaatcgagtcatggagatcgttggcgaggctagtgaggtagcatcgactgatcca
acactggatcagtcaattaagaagaaggatatctgcatcggtgatgaaggatatgatgtt
gctagcgatcaaacatctgaagaagctgaaaatcaggaggcggaagagaaagagctgaag
gaagtggtgagcatcaaactatcaccgaagaagagggctggctataacaaaacgtcaaag
gaaaatgttgtgctcgcctgccactttataggcgagcctattcccgcggccgaagccaaa
cagcgttggccagagagataccagaggaaaaggatctatgtttctggaagtgccaaaagt
gtggatgatgaaccaatattgctggcaaggcagcattatttgaaggccatagtggatgga
gttacttacaacctttatgatgatgcatatgtgaaagcaggtgaaggagaggctgactat
attggtcatatagttgaattttttcaagcaactgataatcaactatactttactgctcaa
tggtttttcagagcagaagatactgttatcaaggaacatgctcattgtcatggagtcaaa
gtggtgcatgattcaagaagagttttcttatcaaaagagacaaatgacaatgtgttggac
tgcattgtctcaaagatacaaattaaacgagtgactccaaatattgatttggaagctaag
gagaaaaacattcctccatgtgatctttattatgatatgtcatattctttggcatattct
acatttgaaaatctgtccaatgaacatgctgggactgatagtggttcttcatccactgtt
tcttcagaagatcctactaatgccacaaatcagaaaacaccagattctgaggctacattt
ggtcaaaagaatgtcatcactttgcttgatctctattcaggctgtggggcaatgtctact
ggtttatgtctgggtgccagtttgtctgacatgaatctccaaacttgttgggcggttgat
ttcaatcaatatgcatgtgaaagcttaaagctcaatcatccagagactcaggtgagaaat
gagaaagccaatgattttttggctcttttgaatgaatgggtgaaattatgcaccaagtac
tgtgtacttagtgaccaaagtttcgatgaagaagaaagtgattttaatggtttagatgat
aaagaacatgaagattcaaagcctccaaatggtgaagaatttgaggttgaaaatttactt
gatatttgctatggtgatccaaataacattggaaaagttggattgatgtttaaggttcgt
tggaaaggatataatcctagctatgatacatgggagccaattgatggcttaagcaattgt
gaagagaaaattatggagtttgtgaagagtggatacaagaagaatattttaccattacct
ggccaagtggatgtgatttgtggtggtccaccatgtcaaggaataagtggatttaatcga
ttcagaaatataaatgccccattagaagatccaaagaatcaacaaatgcttgtttttatg
gacattgttaatttcttgaaaccaaaatatgtccttatggagaatgtggttgacattctc
aagtttgctaatggttttttgggaagatatgcattgagcaggctagttgccatgaactat
caggcaaggcttggtatgatggttgctggatgctacggtttgcctcaatttcgaatgcga
gcattcctttggggtgctcgcccaactgagattttgcctcaatttccattacctactcat
gatgtggtggttcgtgggggtacacctaatgagtttgagcaaaacattgttgcatataat
gaagatcaacatcctcaactcgagaagaaactactcttagaggatgcaatatctgacctc
cctgtgatcaataattatgaagatagagatgaaatgccctatggtagacctccaatcaca
gagttccagaagttcattcgtctttcaaggattgaagctttagcttctgggtctattgtg
gagaggcctattgcaaaatatccactttttgatcacaggcctttgcaattaaatgaggat
gattatcagcgagtttgtgcaataccaaagaaaaagggtgcaaacttcagggatttgcca
ggagttagagttggtaatgataatatagttgagtgggatccagaagtcgagagagtttac
ttgccatctgggaaaccactggttcctgattatgcaatgtcctttatcaaaggaaaatcc
ccgaagccttttggacggctgtggtgggatgaaacggttcccactgttgtaacaagagct
gagcctcacaaccaggtaattttgcacccagagcaagatagagtactctcaattcgtgag
aatgccaggctacaaggcttcccagattactatcaactccgagggtctataaaagaaaga
tacattcaagtgggcaatgctgttgctgttccagttgctagagcattaggttacgcactg
ggtcaagcatatcagggtcatcgcaatagtgagcctctcctcatacttcctcgtcatttt
cctgtcctggatcctgcatctgcaacaattgaagccgaagagagtggttga
DBGET
integrated database retrieval system
