Zingiber officinale (ginger): 122009706
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Entry
122009706 CDS
T08725
Name
(RefSeq) oligoribonuclease-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122009706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122009706
03009 Ribosome biogenesis [BR:
zof03009
]
122009706
Messenger RNA biogenesis [BR:
zof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
122009706
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
RNases
122009706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Stm1_N
PHM7_ext
Motif
Other DBs
NCBI-GeneID:
122009706
NCBI-ProteinID:
XP_042421904
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Position
8A:80656822..80664825
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AA seq
256 aa
AA seq
DB search
MSNLSNIFSILEVDAEDDKEQIISIAVAKDAKKDKKSDVTKTKNQRPRENTNTRDDKVEQ
QTFASPSEDYRMPLVWIDLEMTGLHIDVDRILEIACVITDGKLTKSVDGPDLVIKQPKEC
LDKMGEWCRDHHAASGLTERVLKSTVTETDAENQVIDFVKKHVGSQTPQLAGNSIYMDFL
FLKKYMPSLAAMFSHVLVDVSSIMALCIRWFPKEKKNAPEKTQRHRAMDDIKESINELKY
YKQAIFKAPNNAKYRH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatctttcaaatattttctctattctggaagtggatgctgaagatgataaagaa
cagataatttctatcgcagttgccaaagatgcaaaaaaggataaaaaatcagatgtgaca
aagactaaaaatcaaaggccaagggaaaatacaaacacgagagatgataaagtagaacaa
caaacatttgcatcaccttcagaagactacagaatgcctcttgtgtggattgacttggaa
atgacaggtttgcatattgacgttgatcggatattggagattgcatgtgttataacagat
ggtaaattaaccaaatcagttgatggtccagatttggttattaaacaaccaaaagagtgc
ttggacaagatgggagaatggtgtcgtgatcatcatgcagcaagtggtttgacagagaga
gtgttaaaaagtacagtaacagaaacagatgcggaaaatcaagttatagactttgtgaag
aagcatgtgggttcacaaactccacagttggctggaaattctatttatatggattttctc
ttcttgaagaagtatatgccttctctggctgccatgttttctcatgtgctagttgatgtt
agcagcattatggctttatgcatccgttggtttccaaaagagaagaaaaacgcaccagaa
aagactcaacggcatagagctatggatgacatcaaggagagcatcaatgaattaaaatat
tacaaacaagccatcttcaaagcaccaaacaacgccaagtacagacactga
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