Zingiber officinale (ginger): 122009813
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Entry
122009813 CDS
T08725
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122009813
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122009813
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
122009813
NCBI-ProteinID:
XP_042422039
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Position
8A:86372879..86378754
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AA seq
382 aa
AA seq
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MATTNPFDLLGDNDNDDPSQLIVAQKQKLDAKKPTARASIAPAAVKLPTKPVPPAQAVRE
SREARSNTAPARGGAGRGGSGRGRGDGRVPSRDFGNENPNEFSRGYGGGGGGGGGGGGGG
GGGGEDRDNDKPDKERPPRQPFSGGRRGGYAGRGSYRNDESGGDSERPPRRLYERRSGTG
RGYETKRQGAGRGNWGTVADETLEQEKDDVLKSDDKLPIERHQEQENAPSTEESKDKEGT
ANEAEEKEEDVEMTLEEYEKVKEEKRKALLAMKAEERKVVIDKELQSMQLLTTKKENDPV
FVKLGSDKDGKKKENIDRDEQSKKPLNINEFFKTSPGGRGRGRGRGNRAPSRDSIEGGGS
SFTATAAPSIEDPSEFPTLGAK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacgaatccgtttgatctactgggcgataacgacaacgatgatccttcgcag
ctcatcgtcgcccagaaacaaaagttagatgctaagaaacccactgcgcgggcctctatt
gctccggcagcggtgaagcttccgacgaaaccggtcccccctgctcaagccgtgagggag
tcgagggaagcaagaagcaacaccgctccagcgcgtggtggggctggtcgtggtggatct
ggtcgcgggcgaggcgatggacgagttccaagtcgtgattttggaaatgagaacccgaat
gaattttccaggggctatggtggtggtggtggtggtggtggtggtggaggaggaggagga
ggaggaggaggagaagatcgtgataatgacaagcctgacaaggaacgccctccacgtcag
cctttcagtggtggccgtcgtggtggctatgcaggccgtggaagttataggaatgatgaa
tctggaggcgactctgaacgccctccacgtaggttgtatgagcgtcggagtggaactggc
cgtggatatgagacgaaacgtcaaggtgctggccgtggcaactggggaactgtagctgat
gaaacacttgaacaggaaaaggatgatgtccttaagtctgatgataagttgccaattgag
aggcatcaagaacaggaaaatgcaccctcaacagaggagagtaaggataaggagggcact
gctaatgaggctgaagaaaaggaagaggatgtggagatgactctggaagaatatgagaaa
gtaaaagaggagaaaagaaaagccttgcttgcgatgaaagccgaagagaggaaggttgta
atcgacaaggaattgcagtcaatgcagctactaacaacaaaaaaggaaaatgatcccgtt
tttgtcaaattgggttccgacaaggatgggaaaaagaaagaaaacattgatcgcgatgaa
cagagcaagaaacctctgaacatcaatgagttcttcaagaccagtccaggtggccgtggg
cgtggcaggggaagaggtaaccgtgcaccatcaagagacagtatcgaaggtgggggatca
agtttcactgccactgctgctccatcaatcgaagatcctagcgagtttcccacacttggg
gcgaagtag
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