Zingiber officinale (ginger): 122009837
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Entry
122009837 CDS
T08725
Name
(RefSeq) pleiotropic drug resistance protein 2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122009837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122009837
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122009837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
Rad17
AAA
AAA_25
nSTAND3
RsgA_GTPase
AAA_30
AAA_28
ABC2_membrane_3
AAA_33
ABC_ATPase
AAA_11
Motif
Other DBs
NCBI-GeneID:
122009837
NCBI-ProteinID:
XP_042422081
LinkDB
All DBs
Position
8A:complement(89142088..89156385)
Genome browser
AA seq
1456 aa
AA seq
DB search
MTNDLTRNSSSRRSWADSFRDRADVFRRSLVMEEGDDEENLKWAALEKLPTYDRMRKGII
RQVIDNGNVIASEVDVNNLGPQDRKRLLEQIFKVVEEDNERFLIRLRDRIDRVGLELPKI
EVRYENISVEADVYIGSRALPTLWNFTINILEDIFGLVRFNQSRKKTIKILKDVSGILKP
TRMTLLLGPPASGKTTLLLALAGKLDKRLRQWGKVTYCGHELSEFVPQRTSAYISQLDIH
NGEMTVRETLDFSARCLGVGSRYEMLSELSRRERDAGIKPDPEIDAFMKAAAVEGQRTNV
STDYVLKVLGLDICADILVGDQMRRGISGGQKKRVTTGEMLTGPARALFMDEISTGLDSS
TTFQIIKFIRQMVHVMDGTVLISLLQPAPETFELFDDVILLSEGQIVYQGPREHVVEFFE
FVGFRCPERKGVADFLQEVTSLKDQEQYWYNKDKPYRFISVSEFVELFKQFHVGQELYAE
LTISYDKSKAHPAALTTRKYGISNWELLKACLSREWLLMKRNSFVYIFKTTQITTLSLIA
MTVFLRTKMHHETIPDGNKFYGALFFTLTNVMFNGMAELVMTVEKLPVFYKQRDFLFYPA
WAFGIAYCLLRIPLSFLDTGIWIILTYYVIGFAPAASRFFRQFLALLLVHQMALGLFRFI
AAAGRTMVVANTFGTFALLIVFVLGGFVISKDDIKSWWIWGFWSSPLMYGQNAIAINEFL
DPRWGAPNNDTNIDALTVGTAILKSRGMFSRGYWYWLAIGALIGFIILFNVLFVLALTYL
NPLASAQNAIVDEESSKKKKTSSILNRRIEIIGSIAHSDPQDLSESARRNNSETFSASVH
SAKRGMVLPFQPLSLAFNHVNYYVDMPAEMKRRGIEEDRLQLLCAVSGAFRPGVLTALVG
VSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQETFARISGYCEQNDIHSPYMTIYES
LVYSAWLRLAPEIDKQTRMMFVEEVMELVELDTLRDALVGVPGVDGLSTEQRKRLTIAVE
LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM
KRGGQVIYAGPLGRHSHKLIEYFETIPGVPKIVEGVNPATWMLEISTPQVEASLNVDFAE
IYSNSELHKQIQELIKELSIPPPDSKDLYFPKKYSQSFTTQCQACFWKQYWSYWRNPQYN
AVRFFLTVIIALIFGTMFWQMGDKTSTQQDVLNLVGAFYAAVFFLGSSNSINVQPVVAVE
RTVFYRERAAGMYSAMAYAFAQVSIEALYIFVQGFIYTILLFSMIGFTWHAENFFWLFYF
IVMSFTYFSLYGMMAVALTPNHQVAGIVSSFFYNFWNLFSGFLIARPDIPIWWRWYYWGN
PVSWTIYGVIASQLGKKGGTVQIPGEHDKPLTEYLKDNLGYEYSFVKWAALTNLGFVIMF
FFVFAYSIKFLNFQKR
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgatctcactagaaacagcagcagtcggcggagctgggctgacagcttccga
gaccgagcagacgtattccggcgcagcctggtgatggaggagggcgacgatgaggagaat
ctcaagtgggcagcgctagagaagctgcctacatacgaccgtatgcgcaagggcataatc
cgtcaggtgatcgacaacggaaacgtcatcgccagcgaagttgatgtcaacaatcttggc
ccccaggatcggaagcgcctcctcgagcagatcttcaaggtggtggaggaggacaacgag
cgcttcctcattcgcctccgcgatcgaatcgaccgggtggggctggaacttccaaagatt
gaggtacggtatgagaacatatccgtggaggcagatgtttatattggaagcagagcacta
cccaccttgtggaatttcaccataaacattcttgaggatatctttggtcttgtaagattc
aaccaatccaggaaaaagaccataaaaattcttaaggatgtcagtggaatactcaagcca
acaagaatgacattgctgcttgggcctccagcctcagggaaaacaacactattgcttgca
ctagctgggaaacttgataagagactaaggcaatggggtaaagtcacatactgtggccat
gaactctcagaatttgttcctcaaagaacatctgcttacattagtcagttggacattcac
aatggtgagatgacagttagagaaacattggatttctcagcacgatgtttaggtgtggga
tcaaggtatgaaatgttatcagaattgtcaagacgagagagagatgcaggaattaaacca
gatcctgagattgatgcattcatgaaggctgctgcagttgaaggacaaagaactaatgta
tcaactgactacgttctaaaggtacttggtttggatatatgtgcagacattttggttggt
gatcagatgcggcgaggcatttctggggggcaaaagaaacgagtgacaacgggagagatg
ctaactgggcctgcacgagcactcttcatggatgaaatatcaactggacttgacagttct
acgacctttcaaataataaagttcattaggcaaatggttcatgtcatggatgggacagtg
cttatatctctccttcaacctgcacctgagacatttgaactttttgatgatgttattcta
ttatcagagggtcaaatagtctatcaaggtcctcgagagcatgttgttgagttctttgag
tttgttggctttagatgtcctgaaaggaaaggagttgctgactttcttcaagaggtaact
tctttgaaggatcaagaacaatattggtacaataaggacaaaccataccgttttatttca
gtctctgagtttgtggagctttttaagcaatttcatgtcgggcaagaactatatgcagag
cttactatttcttatgataaatctaaagcacatcctgccgcactgacaacacggaaatat
ggcatttctaattgggaacttcttaaagcatgtttatcaagggagtggttgttgatgaaa
agaaactcttttgtctacattttcaagacaacccagataactacactttctttaatagcc
atgactgtgtttctaagaaccaaaatgcatcatgaaacaatccccgatggcaacaaattt
tatggtgcactcttcttcactttaaccaatgtcatgttcaatggaatggcagaactggtg
atgactgttgagaaactccctgtgttctataaacaaagagatttcttgttttaccctgct
tgggcttttggcattgcatattgtctcctcaggatccctctttctttcttggacactgga
atttggatcatacttacctattatgtgattggttttgcccctgctgcaagccggttcttc
cgccagttcctagcacttctccttgtacatcagatggctcttggcctgttccgcttcatt
gctgcagctggaagaaccatggttgtagccaatacatttggaacatttgctttgcttatt
gtttttgtgctaggaggctttgttatttctaaagatgacatcaaatcctggtggatatgg
ggtttctggagttcccctttaatgtatgggcaaaatgctattgctattaatgagttcctt
gatccaagatggggtgcaccaaataatgacaccaacatagatgcattaactgtaggaact
gctatactcaaatctagaggaatgttttcccgtggctattggtattggcttgctattggg
gctctcatcggatttattattctgttcaacgtattatttgtccttgcgctcacctacttg
aatcctttggcaagtgcacaaaatgcaattgttgatgaggaatctagtaagaaaaagaaa
acttcatcaatattaaatagaaggattgaaataataggaagtatcgcacattctgatcca
caggatttatcagaatcagcaaggagaaacaactctgaaacttttagcgcttcagtacat
tcagcaaagcgaggaatggttttgcctttccagcctctctctcttgctttcaatcatgtg
aactattatgttgacatgcctgctgaaatgaagagacgaggaattgaggaagatcgtctt
caattactatgtgctgtaagcggtgcatttaggcctggagttttgactgcattggttgga
gtaagtggagccggaaagactacattgatggatgttctagcaggaaggaaaactggtggt
tatattgaagggagcattagtatttctggttatcctaaaaatcaagagacttttgctagg
ataagtggttactgtgaacagaatgacattcactcgccatatatgactatttatgaatca
cttgtttactctgcttggctgcgtcttgcacctgaaattgacaagcagacacgaatgatg
tttgtggaagaggttatggagttggttgaacttgacactttgagagatgctctagttgga
gttccgggggttgatggtctatcgactgagcaacgaaaaagactcacaattgctgttgag
cttgttgcaaatccttccatcatattcatggacgagccaacatcaggacttgatgcaaga
gctgcagccatagttatgaggacagtcaggaatacagtggatacaggacgcaccgttgtt
tgtacgatccaccaaccaagcatagatatttttgaagctttcgatgagcttcttttgatg
aaaaggggaggtcaagttatttatgctggccctcttggtcgccactcccacaagctgatc
gaatatttcgaaacaattccaggtgtaccaaagatcgtagaaggtgtgaaccctgcaaca
tggatgttggaaataagtactccccaagttgaggctagcttgaatgtagactttgctgaa
atttattcgaattcggaacttcataaacaaattcaagaacttatcaaggaattgagcatt
ccaccaccagattctaaggatttatatttccctaaaaagtactcccagagttttactact
caatgtcaagcttgcttttggaaacaatattggtcatattggagaaacccacaatataat
gctgtccgatttttcttgacagtcatcatagccttaatatttggcacgatgttttggcag
atgggagacaagacttcgactcaacaagacgttttgaatctagttggagctttctatgct
gcggtctttttccttggttccagcaactctatcaatgtgcagcctgttgtggctgttgag
agaacagtcttctatcgtgaaagagcggcagggatgtactcagccatggcctacgcattt
gcacaagtgagcattgaggcactatacatatttgttcagggattcatctatacaattctc
cttttctcgatgattggctttacttggcatgcggagaacttcttctggctcttctacttc
attgtaatgtcctttacctacttttcactttatggtatgatggctgtggcactcacaccc
aaccaccaagttgccggtattgtgtctagtttcttctacaacttctggaacttgttctca
ggcttcctgattgcacgaccggatattcccatatggtggaggtggtactactggggaaat
ccagtatcttggacaatttatggtgtcatagcatcgcagttggggaaaaaggggggcacc
gttcagattcctggagaacatgataaaccacttacagaatacttgaaagataacctgggt
tatgagtatagctttgttaagtgggcggcattgactaacttgggctttgtcatcatgttc
ttttttgtctttgcatattctatcaagttcctcaactttcaaaagagatag
DBGET
integrated database retrieval system
