Zingiber officinale (ginger): 122009878
Help
Entry
122009878 CDS
T08725
Name
(RefSeq) CSC1-like protein At4g02900
KO
K21989
calcium permeable stress-gated cation channel
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122009878
Transporters [BR:
zof02000
]
Other transporters
Pores ion channels [TC:
1
]
122009878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
122009878
NCBI-ProteinID:
XP_042422122
LinkDB
All DBs
Position
8A:complement(100413161..100462113)
Genome browser
AA seq
759 aa
AA seq
DB search
MASLQDIGMSAAVNIITALIFLMVFAMLRLQPFNDRVYFPKWYLKGIRSSPTHSGNIMRK
FVNLDCRTYLRFLNWMPAALRMPEPELIDHAGLDSSVYVRIYLLGLKIFAPITVLAFGIL
VPVNWTGGTLEKNKDLTFSDLDKLSISNIELGSQRFWAHVGMAYVFTFWTYYVLYMEYKK
IQSMRLHFLATAGRRPDHFTVLVRNVPPDPDESVSEHVEHFFSVNHHDHYLTHQVVYNTN
ELAKLVENRKSLENWFVYYENKSIRNPNKRPTTKTGLFGILGKTVDAIDYYKAEIEKLRK
EEAAERERIISDPAALMPAAFVSFKSRWGAAVCAQTQQSSNPTLWLTDWAPEPRDVYWSN
LSIPFVELTIRRFLMAVALFFLTFFFMIPIAFVQSLANIEGIEKVMPFLRPVMEWELTKS
FIQGILPGIALKIFLILLPTILMTMSKIEGYISLSSLDRRSASKYYLFILVNVFLGSVIT
GTAFQQLDSFLHQSADAIPKTVGMSIPMKATFFITYIMVDGWASVAAEILRLKPLIVFHL
KNTFIVKTDQDREQAMDPGCLEFASSEPRIQLYFLLGFVYFVVAPIFLPFLLVFFGLAYV
VFRHQIINVYNQQYESAAAFWPDVVKRVIIAMIISQLLLMGLMSTKDGSLTIPILVLPLL
TIWFHIYCKTRFEPAFVKFPLQDAMVKDTLERATEPLLNLRAYLQDAYVHPDFHREDIER
PLAIDEEENNLLVPTKRTSYRSTPKDSKYNSEIGSDCDV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcttcaggatattggaatgtctgctgctgtgaacattataacagctcttata
tttttgatggtttttgctatgcttcggcttcaaccattcaatgatagagtgtattttccg
aagtggtacttgaagggaataagaagcagcccaacccattcagggaacattatgagaaag
tttgtcaacttggactgcagaacatatttgagatttttgaattggatgcctgctgcatta
agaatgccagaacctgaattaatcgaccatgcaggccttgattcttctgtatatgtccgg
atatatcttcttgggttgaaaatatttgcgcctataactgttcttgcttttggtatcttg
gttcctgtcaattggactggtggaacactagagaagaacaaagacttgacatttagtgac
ttagataaactctctatatcaaatattgaacttggttcacaaaggttctgggcacatgtg
ggaatggcctatgtatttacgttttggacatattatgtactctacatggaatacaaaaaa
atacaatcgatgaggttgcattttctggctactgctggtcggcgaccagatcattttaca
gttcttgtgagaaatgttccgcctgatcctgatgaatcagttagtgagcatgttgagcat
ttcttttctgtgaatcatcatgatcattatctaactcaccaggtggtatacaatactaat
gaacttgcaaaattggtggagaataggaaaagcttggagaactggtttgtttattatgaa
aacaagtctattcgaaatcctaacaaaagaccaactacaaagacagggctttttggtata
ctgggaaagactgtggatgcgattgactactataaggctgagatagagaagctacggaag
gaagaagcagcagaacgagaaaggataatcagtgatcctgccgctctaatgccagcagct
tttgtctccttcaaaagcagatggggggcagcagtttgtgctcaaacacagcaatcaagt
aatccaactttgtggttaacagattgggctcctgagccacgtgatgtttattggtccaat
ctttccatcccttttgtggagctcacaattaggaggttccttatggctgttgcacttttc
tttcttacctttttcttcatgatcccaattgcatttgttcagtctctagccaatattgag
ggaattgagaaggtcatgccgtttttaaggcctgtaatggaatgggaactcactaagtcg
tttatacaaggtattctaccgggcattgcattaaagatatttcttattcttctacccaca
attctcatgacgatgtccaagatagaaggttatatatccctatcatcattggacaggaga
tctgcttctaagtactatcttttcattctggttaatgtatttcttgggagtgttattact
ggaacagcattccaacaactagatagtttcctccaccaatcagctgatgcaattccaaaa
actgttgggatgtccattccaatgaaagcaacatttttcatcacatatataatggttgac
ggatgggctagtgttgctgcagaaatacttcgactcaaaccattaattgtttttcatctg
aagaacacattcattgttaaaactgaccaagatcgtgaacaggctatggatccagggtgt
ttagaatttgcttcttcagaaccaaggatacaactatacttcttgcttgggttcgtatat
tttgtcgtggctccaatttttcttcccttcctacttgtgttcttcggcctagcatatgtg
gtatttcgccatcagatcataaatgtatacaaccagcaatatgaaagtgctgcagcattc
tggccagatgtcgttaaacgagtgattattgcaatgatcatctcacaacttctacttatg
ggcttgatgagcaccaaggatggctccctcaccattcctatacttgttcttcctctgttg
acaatatggttccacatatattgcaagacccgatttgagcctgcatttgtcaagtttcct
ttgcaggatgcaatggtgaaggacacactagaacgggcaacagaaccactcctaaatttg
agagcttaccttcaagatgcatatgtgcaccctgattttcacagagaagatattgaacgc
ccattggcaattgatgaagaagaaaacaatctactggtgcctacaaaacggacttcatat
aggagcacacccaaagacagcaaatacaattcggagataggttctgattgtgatgtctga
DBGET
integrated database retrieval system
