KEGG   Zingiber officinale (ginger): 122010041
Entry
122010041         CDS       T08725                                 
Name
(RefSeq) autophagy-related protein 18a-like
  KO
K22991  WD repeat-containing protein 45
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122010041
Membrane trafficking [BR:zof04131]
 Autophagy
  Other autophagy associated proteins
   Others
    122010041
SSDB
Motif
Pfam: PROPPIN Beta-prop_THOC3 BCAS3_WD40 WD40 Beta-prop_WDR5 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd CFAP251_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_RSE1_2nd WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_2nd DUF7099 Beta-prop_Vps41 Beta-prop_VPS8 CPSF_A Beta-prop_TEP1_2nd PEP5_VPS11_N Tricorn_2nd Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 122010041
NCBI-ProteinID: XP_042422343
LinkDB
Position
8A:complement(117035908..117044369)
AA seq 452 aa
MAALSIPPPPPPSSTTSSVASIPWPNPVADPDSSSLAPSLADDPNPFPPPVVDHAEEEPH
AGNSMKDDESSEDLASAAPLPPHPVPAASSSSPPRVAESDAADAMSVLHLSFNQDHGCFA
VGTDRGFRIYNCDPFREIFRRDFDGRGIGVVEMLFRCNILAVIGGGPNPNYPPTKVMIWD
DHQSRCIGELSFRSEVRAVRLRRDKIIVVLDNKIFVYNFADLKLMHQIETVPNPKGLCAV
SQQQGSLVLVCPGGQKGQVRVEHYGARRTKFIMAHDSRIACFALSQDGRLIATSSSKGTL
IRIFSTIDGTLLQEVRRGADRAEIYSLAFSSDMQWLAVSSDKGTVHVFNLKVNLGLTAND
KPRPASDPNAPTQSSHLSFIKGVLPKYFHSEWSVAQFRLHENTQYIVAFGHQKNTVVILG
MDGSFFRCQFDPVAGGEMTQLVCYNFLKSESF
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggccgccctctcgatccctcctcctcctcctccttcctccaccacctcctctgttgct
tctatcccatggccgaatcccgtagctgaccccgattcgtcttcgctagccccttctctg
gcggatgatcccaatcccttcccgcccccggtggtcgaccacgcggaggaggagccccac
gcaggaaattccatgaaagatgatgaatcttccgaggatttggcctccgcagctccgctc
ccgccgcatccggtccccgcggcttcgtcctcctcgccgcctagggtagcagaaagcgat
gccgcggatgcgatgtcggttctccacttgtcttttaaccaggatcatggatgcttcgcc
gtcggcaccgatagggggttccggatctataactgtgaccctttccgagagatcttccgc
agggactttgatggtaggggcatcggcgtggttgagatgctttttcggtgcaacatcctc
gccgtcattggcggcgggccgaacccgaactacccgcctactaaggtcatgatctgggat
gatcaccagagccggtgcatcggagagctttctttccggtcggaggtccgtgccgtccgg
ctccggagggacaagattattgtggtgctcgacaacaagatattcgtctataattttgcg
gaccttaaattgatgcatcagattgagactgtgccgaatcccaaggggctgtgcgctgtt
tcacagcaacaggggtcgcttgtgcttgtctgcccaggtggtcagaaggggcaggtcagg
gtggagcactatggggcgaggcgaacgaagttcattatggcacacgattcaagaatagct
tgttttgctctgtcgcaggatggaagattgattgcaacttcaagctctaagggcacgctt
attaggatatttagcacaattgatggtactctccttcaagaagtaagaagaggtgctgat
agagcagagatatacagtttggctttctcttctgacatgcagtggttagctgtctcaagc
gacaagggaactgttcatgttttcaacctcaaggttaatcttggattgacagcaaatgat
aaacctcgccctgcatcagatccaaatgcaccaacacaaagttctcatctttctttcatc
aaaggtgtattgccgaaatacttccattccgaatggtcagtggcacaattcaggttgcat
gaaaatacacaatacattgtggcatttggtcatcaaaagaatactgttgtcattcttggt
atggatggaagtttctttcgatgccaattcgatccagtggcgggtggggaaatgacacaa
ttggtatgctataacttcctaaagtcagaatcattctaa

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