Zingiber officinale (ginger): 122010041
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Entry
122010041 CDS
T08725
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122010041
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
122010041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
BCAS3_WD40
WDR55
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_IFT140_2nd
DUF7099
Beta-prop_IFT122_1st
CPSF_A
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
122010041
NCBI-ProteinID:
XP_042422343
LinkDB
All DBs
Position
8A:complement(117035908..117044369)
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AA seq
452 aa
AA seq
DB search
MAALSIPPPPPPSSTTSSVASIPWPNPVADPDSSSLAPSLADDPNPFPPPVVDHAEEEPH
AGNSMKDDESSEDLASAAPLPPHPVPAASSSSPPRVAESDAADAMSVLHLSFNQDHGCFA
VGTDRGFRIYNCDPFREIFRRDFDGRGIGVVEMLFRCNILAVIGGGPNPNYPPTKVMIWD
DHQSRCIGELSFRSEVRAVRLRRDKIIVVLDNKIFVYNFADLKLMHQIETVPNPKGLCAV
SQQQGSLVLVCPGGQKGQVRVEHYGARRTKFIMAHDSRIACFALSQDGRLIATSSSKGTL
IRIFSTIDGTLLQEVRRGADRAEIYSLAFSSDMQWLAVSSDKGTVHVFNLKVNLGLTAND
KPRPASDPNAPTQSSHLSFIKGVLPKYFHSEWSVAQFRLHENTQYIVAFGHQKNTVVILG
MDGSFFRCQFDPVAGGEMTQLVCYNFLKSESF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccgccctctcgatccctcctcctcctcctccttcctccaccacctcctctgttgct
tctatcccatggccgaatcccgtagctgaccccgattcgtcttcgctagccccttctctg
gcggatgatcccaatcccttcccgcccccggtggtcgaccacgcggaggaggagccccac
gcaggaaattccatgaaagatgatgaatcttccgaggatttggcctccgcagctccgctc
ccgccgcatccggtccccgcggcttcgtcctcctcgccgcctagggtagcagaaagcgat
gccgcggatgcgatgtcggttctccacttgtcttttaaccaggatcatggatgcttcgcc
gtcggcaccgatagggggttccggatctataactgtgaccctttccgagagatcttccgc
agggactttgatggtaggggcatcggcgtggttgagatgctttttcggtgcaacatcctc
gccgtcattggcggcgggccgaacccgaactacccgcctactaaggtcatgatctgggat
gatcaccagagccggtgcatcggagagctttctttccggtcggaggtccgtgccgtccgg
ctccggagggacaagattattgtggtgctcgacaacaagatattcgtctataattttgcg
gaccttaaattgatgcatcagattgagactgtgccgaatcccaaggggctgtgcgctgtt
tcacagcaacaggggtcgcttgtgcttgtctgcccaggtggtcagaaggggcaggtcagg
gtggagcactatggggcgaggcgaacgaagttcattatggcacacgattcaagaatagct
tgttttgctctgtcgcaggatggaagattgattgcaacttcaagctctaagggcacgctt
attaggatatttagcacaattgatggtactctccttcaagaagtaagaagaggtgctgat
agagcagagatatacagtttggctttctcttctgacatgcagtggttagctgtctcaagc
gacaagggaactgttcatgttttcaacctcaaggttaatcttggattgacagcaaatgat
aaacctcgccctgcatcagatccaaatgcaccaacacaaagttctcatctttctttcatc
aaaggtgtattgccgaaatacttccattccgaatggtcagtggcacaattcaggttgcat
gaaaatacacaatacattgtggcatttggtcatcaaaagaatactgttgtcattcttggt
atggatggaagtttctttcgatgccaattcgatccagtggcgggtggggaaatgacacaa
ttggtatgctataacttcctaaagtcagaatcattctaa
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