Zingiber officinale (ginger): 122010056
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Entry
122010056 CDS
T08725
Name
(RefSeq) nuclear transcription factor Y subunit B-3-like
KO
K08065
nuclear transcription Y subunit beta
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122010056
Transcription factors [BR:
zof03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
122010056
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Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
122010056
NCBI-ProteinID:
XP_042422365
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Position
8A:119731255..119732448
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AA seq
215 aa
AA seq
DB search
MADSDNESGGHNHSHSGAGAVGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKET
VQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME
GEKGVGPSPSSSQPQQQDSASSLGTGANVGGYAAGSPAMYGGGMTMMMGQQMYAPQPSSS
PFHRHQIPMSGKSSMGSGGGASDGVNSPSSKPGYK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctgacaacgaatccggcgggcacaaccacagccactccggggcgggggcc
gtgggggagctttcgtcgccgcgggagcaggaccgtttcctgcccatcgccaacgtgagc
cgcatcatgaagaaggcgctcccggcgaacgccaagatctccaaggacgccaaggagacg
gtgcaggagtgcgtgtcggagttcatcagcttcatcaccggcgaggcgtccgacaagtgt
cagcgcgagaagcgcaagaccatcaacggcgacgacctcctctgggccatgaccaccctc
ggcttcgaggagtacgtggagcccctcaaggtctacctgcagcgcttccgcgagatggag
ggcgagaagggcgtcggtccctcaccctcgtcgtcgcagccccagcagcaggactccgcc
tcctccttgggaacgggggccaatgtgggcggctacgctgccggctcgccggcgatgtac
ggcggcgggatgacgatgatgatggggcagcagatgtacgccccgcagccgtcctcctca
ccgttccatcgccaccagattcccatgtcggggaagagcagcatggggagcggtggcggc
gccagcgacggcgtgaattcgccctcttccaaaccggggtataagtag
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