Zingiber officinale (ginger): 122010064
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Entry
122010064 CDS
T08725
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122010064
03012 Translation factors [BR:
zof03012
]
122010064
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122010064
mRNA cycle factors
Stress granule specific factors
122010064
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
eIF-4
122010064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
PA-IIL
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
122010064
NCBI-ProteinID:
XP_042422370
LinkDB
All DBs
Position
8A:complement(121539348..121549234)
Genome browser
AA seq
1857 aa
AA seq
DB search
MSVNQSRAGRAEAQHRKPVRSVSAGQPKGLVGSGGGLNGDDSAPQPSIHSSSSYAASPSS
VAPSLPTNRSFKKSGNEQGNQSGINASSSESSGAAIFHQNLVHNGAHPQIRSPVLSGYSE
SLSPSPAATKPFIPRAPSQSASSSAPMPLPKGDASKTFTLQFGSINPGVMGGLQFPARTS
SAPPNLDEQNHNQAHTKSMRVVPSISVPQIKRDVSVPAPSATYVSALNSSGPPISRMPSP
LHTQFQHQQTQILPKFGVPNVQMHQPGFAANSLQMAMTLPMGNSPQVPQQILVPSIQPHF
VQQQAMMHQGQALGFARSIGQLLPPQLGNMRIGISPQFAQQQPVKYGGARKTTVKITHPD
THEELRLDKNTDLGKDGDLAGQRPQPNVIPQPHSIPTYTHQTNFSPMQQNSYSHSQHIFP
NSVPLGSGQMPTNSQAPRYNYPLNQIGLNLNFLDSSAINHIPSGKSLSTPLHGISEGLKL
EALSVSASLPCSGQVTLRPPVGSKTVKTGASLSSPSVVITMPSTKVEPQMPVKTTADDTT
LNERRTETNPGGSSQQIKLTSSSSVSMSVPVTDTNTTIPLNSRLFMLSEASLSPEMPNRE
SGSLLDGNHGEKNEHAQRCDTSKDNHGKTSKKDFRNTQQNHQLDASPKCENRTLTETGAA
EPVVDKVMPAASGSFPEISGKEASLDASVGYGNLSSAAPDVLSNKENLSSHASTSLDHVV
GGIPTYCLTVNLRVGSTALAVGREKRSELTENESSEAANDSLEDFSKAKVHSSSAVAIPS
EFENITLLKQDDKQEKCLKGKSIKYDEVESKLLNSSGGDFAVLQESKTQNQQITSTDASL
NSTGSDTAVDCDILGARDAKDNLNTFSSKLKLKPIKDGLIDCSGARMETVLVPIPSVSVE
HKQDAKVDLPSDRLTSSTILGQKNKPLLENTKPKVTAGKKKNRREIFSKADAACASDLYT
AYKGPEVKHEVVLKSESSNSPTAAANITPIGCPTKDVVSSDEDLQNKAELDDWENAVDIS
TPKLKTLKNGQDADEARKQRDGDVCKATTWKYSRDFLMTLSQHFTQLPVDFDKSSDILDV
LLIFSQGKSPLQSPRRINDRPSSRGDCRPVGLLDDDKWTKSHASFGRDGNATINLRPGQG
GSHVVLRDLPRQASGQLGGILSGPMQSPSSQGGTQRGNLDAADRWQRARGLIPSSQTPLQ
IMHQAEKKYVVGKVSDEEEVKQRQLKAILNKLTPQNFEKLFTLVEEVNIDNLVTLTGIIS
QIFDKALMEPTFCEMYANFCFHLASALPDFSEANEKITFKRLLLNKCQEEFERGEKEQAE
ANNVEEEGEVKQSKEERDAKRLQVRRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQY
QNPDEEDIEALCKLMSTIGEMIDHPKAKEHMDAYFDMMAKLSTSQQLSSRVRFMLKDAID
LRKNKWQQRRKIEGPKKIDEVHRDAVQERQAQSSRLSRGPVISSVPRRGQAADYGSRGSA
PLSSSSYQQVGGHRALPLQVCGYGIQDPRLEDRPQFEGRNTSLPLQHRSNDDDSISLGPQ
GGLARGMSVRGHPSISHAPPPEISPNAGEQHRLSSGTNIIYTVERSPGVTYDQLSHRDWN
NQYCSGDVKISDHTFERSTTSDLPGGQLYGNSSSCLTAVSGTKAFSEEVLREKSISAIRE
FYSAKDEKEVALCIKELNAPSFYPSMISIWVTDSFERNGNERDLLVKLIINLCKSRDCLL
SQSQLLQGFGSVLASLEDAVNDAPRAAEFLGCIFAKTILEDVAALREIARLILEGGEEPG
QLREVGLAAEVLGNIFETIKMERGDSILNEIRVSSNLRFDDFLPPSPLKAKKLDAFL
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaaccaatccagggcaggcagggcggaggcgcagcataggaaacccgttcga
tcggtaagtgctggtcagccaaagggattagtcggcagcggcggtggcttgaatggcgac
gattccgccccacagccatctatccactcgtcctcatcctatgctgcttctccttcgtcg
gttgcgccgtcattgccgactaatcgaagcttcaagaaatcaggtaatgagcaaggcaat
cagtctggaataaatgcatcaagctctgaatcaagcggtgctgccattttccatcaaaat
cttgttcataatggcgctcatccccagatacgttctcctgttctttcaggatattcagaa
tcactgtcaccatcaccagctgctacaaaaccttttatacctagagctccttctcaatca
gcttcaagttctgcaccaatgccattgcctaaaggagatgcatccaagacttttactctt
cagtttggctccataaatcctggagtgatgggtggattacagtttcctgctcggaccagc
tcagcaccgccaaatctcgacgagcaaaatcacaaccaggctcacaccaagtcaatgaga
gttgttccttccatttctgtaccacagataaagagggatgttagtgtaccagccccgtct
gccacttatgtatctgcattaaattcctctggtccgccaatttctaggatgccttcaccc
ctgcacactcaatttcaacatcagcaaacacaaattctgccaaaatttggtgtccctaat
gtacagatgcatcagcctggttttgcagccaattcattgcaaatggcaatgacattacct
atggggaatagcccccaagttccacagcagattcttgttccaagtattcaacctcatttt
gtgcaacaacaggcaatgatgcaccagggacaggcacttgggtttgctcgttctattggt
caactgttgcccccacaattaggcaacatgagaattggcatttctccacagttcgcacag
caacaacctgttaaatatggtggggcacggaagaccacagtcaagattactcatcctgac
actcatgaagaactaaggcttgacaaaaatactgatttgggtaaggatggtgatcttgct
ggacaaaggccacagccaaatgtgattccacagcctcattctattcccacatatactcat
caaacgaatttctctccgatgcagcaaaattcttatagccattctcagcatatttttcca
aattctgttcctctgggaagtggacagatgcctacaaactcacaggccccaaggtataat
tatcctctcaatcaaattggcctaaacttgaacttcttagactcatctgcaatcaaccat
attcctagtggaaaaagtctatctacacctctgcatggtatttctgaagggcttaaattg
gaagcattgtcagtttctgcctcactgccctgttcaggccaggtaactttgagaccgcct
gttggatcaaaaactgtgaaaactggggcatctttgtcgtcaccttctgtggttattacc
atgccttccaccaaagtagaaccacaaatgccagtaaaaactacagcagatgatactact
cttaatgaaagacggacagagaccaatccaggtggctctagccaacagattaaattgact
tccagttcatcagtcagtatgtctgtgcctgtcactgatacaaataccacaattcctctt
aactcaagactgttcatgctttctgaagcttcactgtctccggaaatgccaaacagggaa
tctggatcacttttggatggaaatcatggcgaaaaaaatgagcatgctcaaagatgtgac
acttcaaaggataatcacgggaagacaagcaagaaggattttagaaacacccaacaaaat
catcagttagatgcatctcctaaatgtgaaaataggactcttacagaaactggagctgct
gagccagttgtagataaggtaatgcctgcggcatctggctcatttccagaaatatcaggt
aaggaagcatcactggatgcttcagttggttatggcaatttgtcttctgcagcacctgat
gttttatctaacaaagagaatctatcttctcatgcttctacctcactggatcatgtagtt
ggtggaattcctacctattgtctgactgttaacttaagggtgggaagcacagctttggct
gttgggagagaaaaaagatctgagctaacagagaatgaatcctcggaagcagcaaatgat
tcattagaagattttagtaaagctaaagtacactcatcttctgctgttgcaataccttct
gaatttgagaacattacattgttaaaacaagatgacaaacaagaaaaatgtttgaaaggg
aaatctatcaagtatgatgaggtagagagcaaacttcttaacagctctggaggtgatttt
gcagtattgcaggaaagtaagacccagaatcaacaaattacctctactgatgcatcttta
aactcaactggttctgatactgcagttgattgtgatattctgggtgcaagagatgccaag
gacaacctcaataccttctcaagcaaactcaaactgaaacccatcaaggatggtttgatt
gattgtagtggagcacgcatggaaacagtccttgtccccataccatctgtgtctgtggaa
cataaacaagatgctaaagttgatttgcctagtgatagattaacgtcttcaacaatcttg
gggcaaaagaataagcctttgttagaaaacacaaagcccaaggtcactgctggcaaaaag
aagaataggagggagatattttctaaagctgatgctgcatgcgcatctgacctttacact
gcatacaaaggaccagaggtaaaacatgaggttgttcttaagtcagaaagttcaaatagt
ccaacagctgctgcaaatatcacacccattgggtgtcctactaaggatgtggtttcaagt
gatgaagatttgcagaataaggctgagttagatgattgggaaaatgcagttgatatatct
actcctaagctaaaaacactgaaaaatgggcaggatgctgatgaggcaagaaagcaacgt
gatggagatgtttgcaaagccactacttggaagtactcgagagatttcttaatgactctc
tcacaacattttactcagcttcctgttgattttgacaaaagttcagatatattggatgta
ttgttgattttttcacaaggaaagtcaccattgcaaagtcctaggaggatcaatgatcga
ccatcttctcggggagactgccgtcctgttgggctgttggatgatgataaatggacgaaa
tcacatgcatcctttgggcgtgatggaaatgcaactattaatcttcgtccggggcaaggt
ggtagtcatgttgttttaagggatctacctcggcaggcatccggccaacttggaggaatt
ctatcaggaccaatgcaatctccatcatctcagggaggcacacaacgtggtaatcttgat
gccgcagatcggtggcaacgagcaagaggtttgattccctcttctcagactcccctacag
ataatgcaccaagccgagaagaagtatgtagttggaaaggtgtctgatgaggaagaagta
aagcaaagacaactgaaagccatacttaacaagctgactcctcaaaattttgaaaagctc
tttactctggttgaggaggttaatatagataatctggtaacccttactggcatcatctca
caaatatttgacaaagctttgatggaaccaactttctgtgagatgtatgctaatttctgt
tttcatctagcaagtgcattgccagatttcagtgaagccaatgagaaaataacttttaaa
agattgctcctgaataaatgccaggaggaatttgaaagaggggagaaagaacaggctgag
gctaataatgttgaagaggaaggtgaggttaagcagtccaaagaggaaagggatgcgaaa
aggctgcaggtccgcaggcgcatgttaggtaatatacgtttgattggagaattatacaag
aagaagatgttaaccgagagaattatgcatgaatgtatcaagaaattactgggtcaatat
caaaatcctgatgaggaagatattgaggcactgtgcaaattgatgagtacaattggcgaa
atgatagatcaccccaaggcaaaggaacatatggatgcatattttgacatgatggccaag
ctttcaacaagtcaacagctatcttctcgtgtaagattcatgttgaaagatgcaattgat
cttagaaagaataaatggcaacagaggagaaaaattgagggcccaaagaagattgatgag
gttcacagagatgcagtacaagaaaggcaagctcagtctagtagattgtctcgtggtcct
gtcattagtagtgtcccaagacgtggtcaagcagctgattatggttctcgtgggtctgct
ccattaagctcttcaagttatcagcaggttggtggtcatcgtgcattgccattgcaggtt
tgtggctatggtattcaagatccgcggttagaggatagacctcagtttgaaggacgaaat
acatcacttcccctccaacataggtctaatgatgatgattctatttcacttggtccccaa
ggtggcctagcacggggaatgtctgtccgtggacacccatcaatatctcatgcaccacct
cctgaaatttctccaaatgctggtgaacagcatagattgtcatctggtacaaatattatt
tatacagtagaaaggtctcctggagtgacatatgatcaactaagccatcgagactggaac
aatcagtactgcagtggagatgtaaaaatttcagaccatacatttgaaagatctacaaca
agtgacctacctggcgggcaattatatggcaattctagtagctgcctaactgcagtttct
ggaacaaaagcattttcagaagaagtcttgcgagaaaaatccatttcagctattagagag
ttttacagtgccaaggatgagaaggaagttgcattatgcatcaaggaattgaatgcacca
agcttttatccatctatgatctcaatatgggttactgactcctttgaaagaaacggtaat
gaaagggatctcctagtgaagcttattatcaacctctgcaaatctagagattgcttgctt
agtcaatcgcaactactccaggggtttggatctgttcttgcttcattggaggatgctgta
aatgatgcaccgagagcagcagagtttcttggttgcatttttgccaaaactattttggaa
gatgtggcagcattgagagagattgcaagattgatacttgaaggaggtgaagagccgggc
caactaagagaggttggcctagcagcagaggtgcttggtaacatatttgagaccataaag
atggaaagaggagattccatcttgaatgagatccgtgttagctcaaatctccggttcgat
gacttcctaccaccgtctccattgaaagcaaaaaagttggatgcttttctttag
DBGET
integrated database retrieval system
