Zingiber officinale (ginger): 122010121
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Entry
122010121 CDS
T08725
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122010121
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
General mRNP proteins
122010121
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_7
Motif
Other DBs
NCBI-GeneID:
122010121
NCBI-ProteinID:
XP_042422460
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All DBs
Position
8A:125123327..125136926
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AA seq
600 aa
AA seq
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MEFDEYEYLEKTVENPELSGEKPSANGAGEKDRKKSSKHRSSDDADRDSERRSKRSRSEE
KSSREHRDRHRESGSSRHRDRGSPDRRDKERHRDRDRERDREGREAERIQEKERIREREK
EKEKEMEREREREREREKERERPRRSSSRSERHRDEERERYIDKSKERDYRERDRESRYA
RANSDGHHKMSIVEEFRHHREKKEDGAAEPEADPERDQRTVFAYQLSLKADERDVYEFFS
KAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNL
VQSNTTAGGTGLTGPNSGAARRLYVGNLHLNITEPQLRQVFEPFGQVELVQLPLDPLTGL
CKGYGFIQFARLEDARAAQSLNGQLEIAGRTIKVSAVTDQTGVQDTGTNAADLDDDEGGG
LSLNASSRALLMQKLAGTAGSIPGTLAAPAANPGLLTPAASILGPSMIPSILQPSVPPFV
GLPTSGLPVASTAAAPPLHTAGVPSECLLLKNMFDPTVESEPDFDLDIKEDVHDECSKFG
TVKHIYVDKNSAGYVYLHFEDVTSSMKAQNALHGRWFAGKMITATYMAPQQYMAKFPNAS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtacctcgagaagacggtggagaatcctgagctctccgga
gagaagccgtcagccaacggcgccggggagaaggaccggaagaagagctcaaagcaccgc
tcgtctgacgacgccgaccgcgattccgagcgccgttctaagcggtcgaggtcggaggag
aaaagcagccgtgagcaccgcgatcggcaccgtgagagcggctcgtcccgccaccgcgac
aggggttcaccagatcgccgggacaaggagcggcacagagaccgcgaccgggaacgggat
cgtgaggggagggaggcggagaggatccaagagaaggagaggatcagggaacgggagaag
gagaaggaaaaggagatggaaagggaaagggaaagggaaagggagagagaaaaagaaaga
gaaaggccgcggaggagcagtagccgttcagagaggcacagagacgaagaacgggagaga
tacatagataagagtaaggagagagactacagagaaagagatcgcgagtccagatatgct
agagcaaactcagatggtcatcacaaaatgagcattgttgaggaattcagacatcaccga
gaaaagaaagaagacggagcagctgagccagaagctgatcctgaacgagatcaaagaacc
gtatttgcttatcagctttctttgaaggcagacgaaagagatgtttatgaatttttctca
aaagcaggaaaggtgcgtgatgttcgcctgataatggatcggaattctagacgttctaaa
ggagttgggtacattgagttctatgatgtaatgtcagtcccaatggcgatagctctttca
ggccaacttctccttggtcagccagttatggtgaaaccctcagaggctgagaaaaacttg
gttcagtcaaacacaactgcaggaggaacagggctaactggaccaaattcaggtgctgct
agacggttatatgttggtaatcttcatttgaacataaccgagcctcaacttcgccaggtc
tttgaaccatttggacaagttgagctagttcaattgccccttgatccgcttaccgggctt
tgcaaaggctatggttttatacagtttgctcgtcttgaagatgctagagctgcacagagt
ttaaatgggcaattagaaattgctggcaggacaataaaggtttcagctgtgacggatcaa
actggagttcaagatactgggacaaatgctgctgatcttgatgatgatgaaggcggaggc
ttgtctctcaatgctagttccagagcacttttgatgcagaaattggcaggcactgctggc
agtattcctggaactcttgctgctcctgctgccaatcctggccttctcactccagctgca
tcaattctgggtccttctatgattccttcaattctacagccttctgtacctccatttgta
ggccttccaacttcaggtctgccagttgcttcaacagctgcagctcctcctctacatact
gctggggtccctagtgaatgtttactgctgaagaatatgtttgatcctactgtggagagt
gaaccagattttgatttagacattaaggaggatgtgcatgatgaatgctccaagtttgga
acagtaaagcacatttacgtggacaaaaatagtgctgggtatgtatatctccactttgag
gatgtaacctcatccatgaaagcacagaacgcacttcatgggaggtggtttgctggaaag
atgatcactgcaacttacatggccccccagcagtatatggcaaaatttccaaatgctagc
tga
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