Zingiber officinale (ginger): 122010223
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Entry
122010223 CDS
T08725
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
zof03015
mRNA surveillance pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122010223
09122 Translation
03013 Nucleocytoplasmic transport
122010223
03015 mRNA surveillance pathway
122010223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122010223
03041 Spliceosome [BR:
zof03041
]
122010223
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
122010223
Spliceosome [BR:
zof03041
]
Common components
Common spliceosomal components
Cap binding complex
122010223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
122010223
NCBI-ProteinID:
XP_042422619
LinkDB
All DBs
Position
8A:129309378..129319698
Genome browser
AA seq
246 aa
AA seq
DB search
MASLFKDLAKLSAYRDRRFHGNQEEYERALQASTTVYVGNMSFYSTEEQVYELFSRAGEI
KKIIMGLDKNTKTPCGFSFVLYYSREDAEDAVKYISGTMLDDRLIRVDFDWGFEEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKMVQRELEAQRELVDYGTDALGAFQPAGPYGRHGGE
HGHGGSYRHGRDHRKRYRDDDRSTSERVSSYESRKTTDQEQRPEKNPRFRESGDSDEEDD
DRRRRR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggatctcgctaagctgtcggcctacagggacaggaggttccac
ggcaaccaggaggagtacgagcgggcgcttcaggcgtcgacgacggtctatgtcggcaac
atgtcattctactccactgaggaacaggtttacgagctcttctcccgcgcgggagagata
aagaagatcatcatggggctggacaaaaacacaaagaccccttgcggcttctcctttgta
ttgtactattctagggaggatgctgaagatgctgttaagtatattagtgggacaatgctc
gatgatcgtctgatacgtgtagattttgattgggggtttgaggaaggcaggcagtggggt
cgtggtcgaagtggtggacaagtgagagatgaatatcgtactgactatgatccaggtaga
ggtggctatggaaagatggttcagagagagctagaagcacagagagaattagtagattat
ggtacagatgctctaggtgcttttcaaccggctggcccatatggcaggcatggcggagaa
catggacatggcgggtcatataggcatggtagagatcatcgaaaacggtatagagatgac
gatcgctccacgtccgaaagagtatcaagttatgaatcaaggaaaactacagatcaggag
cagagaccggagaagaaccctcggtttcgagagagtggtgactccgacgaagaagatgat
gaccggagaagacgtcggtaa
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integrated database retrieval system
