Zingiber officinale (ginger): 122010226
Help
Entry
122010226 CDS
T08725
Name
(RefSeq) starch synthase 1, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00500
Starch and sucrose metabolism
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122010226
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
122010226
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
122010226
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Storage polysaccharide
122010226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
HMA_2
Glyco_transf_4
Motif
Other DBs
NCBI-GeneID:
122010226
NCBI-ProteinID:
XP_042422624
LinkDB
All DBs
Position
8A:complement(129340665..129346547)
Genome browser
AA seq
644 aa
AA seq
DB search
MELLRARPSPQAAASLRPSYRHRFLSVGPLRRSIALRCKREDQDWPTLASGKPAEAENGP
LMALPTARVELNGNGMVSVSGILDTITEVEDSSLFSNTIVNEIEQDKVLVSGNVLDLTAE
ENEIDEQEKSKASITHNIIFVSSEAAPYSKTGGLADVCGSLPIALASRGHRVMVITPRYL
NGVSDKNFVNATDLMVRIKVSCFGGEHEISFFHEYREGVDWVFVDHPAYHRPGNPYGDSS
GAFGDNQFRFTILSYAACEAPLVLPLGGYTYGEKSLFVINDWHTSLVSVLLAAKYRPHGV
YKDARSVLVIHNLAHQGVEPAITFSNLALPTEWYSSLEWIFPTWARKHALDRGEAVNFLK
GAIVTCDRIVTVSQGYSWEITTSEGGNGLNELLSNRKYVLNGITNGIDVDEWNPTSDKHI
PFHYSVDDLSGKTQCKAALQTELGLPVRPDTPLIGFIGRLDYQKGTDLICSALPELLQDD
VQFVMLGSGDAKTESWMRWAESVYNEKFRGWVGFNVPVSHRITAGCDIFLMPSRFEPCGL
NQMYSMRYGTVPVVSSTGGLKDTVENFNPYANDGSGQGTGWRFSPFCKEAMLAALRMAIQ
TYREHKTSWEGLMQRGMSKDYTWNSAAIQYEQVFNWAFTDPPYV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaattgctgcgcgctcgaccctctccccaggccgccgccagcttgaggccgtcgtat
cggcaccgtttcctctccgtcggaccgcttcgtcggagcatagcgttgcggtgtaaaaga
gaggaccaggactggccgaccctggcttccgggaaaccggcggaggctgagaatggcccg
ctgatggctcttcctaccgctcgggttgaactcaatggcaatggaatggtctcagtttct
ggaattcttgataccattactgaagttgaagattctagccttttctctaataccattgtc
aacgaaattgagcaagacaaagttttagtttctggcaatgttctggatcttactgcagaa
gagaatgaaattgatgaacaagagaaatccaaggctagtataactcataatattattttt
gttagctctgaagctgctccttactcaaaaacaggaggattagcggatgtttgtggttca
ttacctattgctcttgcctcaagaggacatcgagtaatggtgatcactccaagataccta
aatggtgtttcggataaaaactttgttaatgcaactgatctcatggtgcgcatcaaagtt
tcatgctttggaggagagcatgaaatctctttctttcatgaatacagagagggtgttgat
tgggtatttgttgatcatcctgcttatcacagacctggaaatccgtatggcgattcaagt
ggagcttttggtgacaatcagttcaggtttacaatcttgtcatatgcagcttgtgaggct
ccattagtgctacctctgggaggttatacatatggagagaaaagccttttcgttattaat
gattggcacacatcacttgtatcagttcttctggctgcaaaatatcgtccacatggtgtt
tacaaagatgctcgcagcgtacttgttattcataacctcgcccaccagggtgtagaacca
gcaattacatttagcaacttggcactgcctacagagtggtatagttctcttgaatggatt
tttcctacttgggctcgaaagcatgcgcttgacaggggtgaggcggttaattttcttaag
ggtgcaattgttacatgtgatcgaatagtcactgtcagtcagggttactcttgggaaatt
acaacttcagaaggtgggaatggtctaaatgagcttctaagcaaccgaaaatatgttttg
aatggaatcacaaatgggattgacgtcgatgaatggaatcctacttcagacaaacatatt
ccgttccattattcagttgatgatctctctggaaagactcagtgcaaagcagctttacag
acagagcttggtcttcctgtcaggcctgataccccactgattggattcattggaagattg
gattatcaaaagggcactgatttgatctgttcagcattgccagagttgttgcaagatgac
gtccaatttgttatgcttggatcaggggatgcaaaaactgaaagttggatgcgttgggcc
gaatctgtctacaacgaaaagttccgtggatgggtcggatttaacgtcccagtttctcat
agaataactgctggttgtgacatattcttaatgccctcgagattcgaaccctgcggcttg
aatcagatgtactccatgagatatgggactgtccctgtcgtcagctccaccggcggcctc
aaagatactgttgagaatttcaatccctacgcaaacgatggcagtggtcaaggaacaggg
tggagattctcaccgttttgcaaggaggccatgctagcggcattgaggatggcaattcaa
acgtacagagaacataaaacatcctgggaagggctcatgcagaggggaatgtcaaaagat
tacacctggaacagtgctgcgatccaatacgaacaggtcttcaactgggcatttacagat
cctccatacgtttga
DBGET
integrated database retrieval system
