Zingiber officinale (ginger): 122010452
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Entry
122010452 CDS
T08725
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122010452
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122010452
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122010452
03029 Mitochondrial biogenesis [BR:
zof03029
]
122010452
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
122010452
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (G)
122010452
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122010452
Prokaryotic type
Other AARSs
122010452
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
122010452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
SMMA_C
Motif
Other DBs
NCBI-GeneID:
122010452
NCBI-ProteinID:
XP_042422917
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All DBs
Position
8A:complement(140715340..140731013)
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AA seq
663 aa
AA seq
DB search
MFCRSLHSFPHSVMARSIAQHIVITHCHNRLIGGGYFRVTSRSLDLLRRARVFVSAMSNE
IVPMSSPLEAPTTSRNIKRVGSVKQQLSRLVKESLESLFPDEVQPIVAACQAKFGDYQCN
NAMVIWSQLKGKATQFKNPNSIGQAIAKNLPESEMIESTSVAGPGFVNIELSNKWISKHI
QNMLVNGIEQWAPILSISRAVVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLR
RNHVGDWGTQFGMLIEYLFEQFPNWEDAGDQAIGDLQAFYKASKKKFDDDPDFKARAQQA
VVKLQSGEGKYRHAWQKICEISRKEFDLVYQRLNVQLEEKGESFYNPYIRGVLEEFERNN
LIKESEGARVVEIDGYDIPLIVVKKDGGYNYASTDLTCLWYRIKEEKAEWIIYVTDVGQQ
QHFHMFFSAARLIGWLPASKDAYPKVSHVGLGLVLGSDGKRFRTRSSEVVRLVELLDEAK
DRSRAELIKRLEDNGKITDWTDAELESTAEAVGYGAIKYADLKNNRLTNYTFSFDQMLND
KGNTAVYLLYAHARICSIINKSSKDIEELKKIGKIVLDHVDERALGLHLIQFAEIVEEAC
SNLLPNVLCEYLYNLSEMFTGFYTSCQVIGSEQEESRLLLCEATAIVMTKCFHLLGITPV
YRI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttctgccgcagcctccattcatttcctcatagtgtgatggcccgaagcatcgcccag
cacattgtcattacacactgccataaccgcctcattggtggaggctactttcgtgttact
tctagaagtcttgatttgttgagaagagctagggtgtttgtctctgcaatgagcaacgag
attgtgccgatgtcttcgcccttggaagcgccaactacgagcaggaatataaagcgagtt
ggaagcgttaaacaacagctttcaagattggtgaaagaatcccttgaatcgttattccca
gatgaagttcagcccattgttgcggcttgccaagcaaagttcggtgattatcaatgcaac
aatgcaatggtaatttggtcacaattgaaggggaaagcaacccagttcaagaatcccaat
tccattggccaggcaattgccaaaaatcttcctgaatctgagatgattgaatctacctct
gttgctggacctggatttgtaaatatagaattgtcaaacaagtggatatctaagcatatt
caaaacatgttggtaaatggcattgagcaatgggcaccaatactttctattagtcgagca
gtggtagacttctcatcacctaatattgcaaaggaaatgcatgttggtcacttaagatcc
acgattattggtgacactttagctcgcatgttggagttttcaaatgtggaagtccttcga
aggaatcatgttggtgattggggtacacagtttggcatgctaattgaatatttgtttgaa
caatttccaaattgggaggatgctggggatcaagctattggtgaccttcaggctttttac
aaggcatcaaagaaaaagtttgatgacgatccagatttcaaggcaagggcacaacaagct
gttgtgaaattgcagagcggggaaggcaaatataggcatgcttggcaaaagatatgtgaa
ataagcagaaaagaatttgatttggtttatcaacgtcttaacgtccaattggaagaaaag
ggcgagagcttttataatccttacatcagaggggttttggaagagtttgaaagaaacaat
cttattaaggaaagtgaaggtgcacgtgtggtggagattgatgggtatgacattcctttg
attgttgtgaagaaagatggtggatacaactatgcctctactgacctgacttgcctgtgg
taccggataaaggaagagaaagctgagtggattatttacgttactgatgttggtcagcag
caacatttccatatgttcttcagtgctgctagattaattggttggcttccagcttctaaa
gatgcatatccgaaggttagtcatgtgggattaggtttggttcttggatcagacggaaaa
cgttttcgaactcgtagctcagaagttgtccgtttggttgagttacttgatgaagctaaa
gatcgcagcagagctgaattgataaagcggcttgaggacaatggtaaaattactgattgg
acagatgctgaacttgagagtactgctgaagcagttggttatggtgctatcaaatatgca
gacctgaagaacaatcgcttgacgaactatacatttagttttgatcagatgctgaatgac
aagggaaatactgctgtctaccttttgtatgcacatgctcggatatgctccatcattaat
aaatctagcaaagacatagaagaactaaagaagattggaaaaattgtgctggatcatgtt
gatgagcgagccttagggcttcatttgattcaatttgcagagatagtcgaggaggcgtgt
tccaatctgcttcccaatgttttgtgcgagtatctatacaatttatctgagatgttcacc
gggttctacactagttgtcaggtgattggatcagagcaagaagaaagcagattgttatta
tgtgaagccactgccatcgtgatgacgaagtgcttccatctccttggaatcacgccagtt
tatagaatttaa
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