KEGG   Zingiber officinale (ginger): 122010587
Entry
122010587         CDS       T08725                                 
Name
(RefSeq) guanine nucleotide-binding protein subunit beta-like protein isoform X1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03010  Ribosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    122010587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zof03019]
    122010587
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    122010587
Messenger RNA biogenesis [BR:zof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     122010587
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122010587
  Exosomal proteins of colorectal cancer cells
   122010587
  Exosomal proteins of bladder cancer cells
   122010587
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st DSE1_N NBCH_WD40 Beta-prop_SPT8 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_HPS5 TRM82_WD ASA1 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_DCAF12 Beta-prop_RIG_2nd CFAP251_N Beta-prop_NWD2_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_DCAF4 PROPPIN PAC11 WD40_RFWD3 eIF2A Beta-prop_pof12 Beta-prop_NUP159_NUP214 Tricorn_2nd
Other DBs
NCBI-GeneID: 122010587
NCBI-ProteinID: XP_042423043
LinkDB
Position
1A:complement(142619695..142627464)
AA seq 329 aa
MASTLVLRCTMRGHSDVVTAIAAPIDNSDMIVSSSRDKSLLVWNLTKDSPTSGVDGSGEG
YYGVPRRRLTGHSHFVQDVALSSDGQFALSGSWDGDLRLWDLSTGATTRRFSGHVGHTKD
VISVAFSVDNRQIMSASRDRTIKLWNTLGECKYTIQGADAHSNWVSCVRFSPNALLPAIV
SGSWDRTVKVWNMTNCKLRCTLAGHTGYVNTVAVSPDGSLCASGGKDGFTLLWDLGEGKR
LYALDAGAIIHALCFSPNRYWLCAATRESVKIWDLESKSVVQDLKPETTATNNQVLYCTS
LTWSADGSTLFTGYTDGAIRVWEIRYYNA
NT seq 990 nt   +upstreamnt  +downstreamnt
atggccagcaccctggtcctccgctgcacgatgcgcggtcactcggatgtggtcactgcc
atcgctgcccctatcgacaactccgacatgatcgtttcctcctcccgggacaagtccctc
ctcgtctggaaccttaccaaggactctcccacctccggtgttgacggttccggagagggt
tactatggcgtgccccgccgtcgcctcactggccactcccacttcgtccaggacgtggcc
ctctcctccgatggacagttcgccctttccggctcctgggatggagacctccgactctgg
gatctctcaaccggtgccacaacacgccgttttagcgggcatgttgggcacaccaaggat
gtcatctccgtcgcgttctctgtcgacaaccgccagatcatgtccgcctcccgcgaccgc
accatcaagctctggaatacactcggtgagtgcaagtacactattcagggtgccgatgcg
cattccaactgggttagctgcgttcgcttcagtcccaacgctttgctgcccgccatcgtc
tccggatcctgggaccgcactgtcaaagtatggaacatgaccaactgcaagctgcgatgc
acactcgcaggccatactggttacgttaacacggttgccgttagccccgatggttccctc
tgcgctagtggtggtaaggatggattcacgctgctctgggacctgggcgaggggaagcgc
ctttatgcacttgatgctggtgccatcattcacgcgctatgcttcagccccaataggtac
tggctttgtgctgccactcgggagagcgtcaagatctgggaccttgagagcaaatctgtt
gtgcaggaccttaagcctgagacgaccgccaccaataaccaggtactgtactgcacaagc
ttgacttggagcgcagatggtagcacactcttcactggttacacagatggagccatcaga
gtatgggagatccgatactataatgcataa

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