Zingiber officinale (ginger): 122010893
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Entry
122010893 CDS
T08725
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122010893
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122010893
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122010893
NCBI-ProteinID:
XP_042423295
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Position
8A:61069943..61072837
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AA seq
480 aa
AA seq
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MEQKQSAPVKRSRCLWGGNYGEKEARGTESEPQGIRVLAFSVGRLLKRLLDHVEGCKVQS
IINNTFPQEERRGAPCCRHGEESVCDDQAAPPTRLSIRGSRAVARASGTYNVRDFGAKGN
GVTDDSQAFMEAWKKACASSGRTKVLVPAGTYFLNPIEFSGPCKDVNDLIFQFHGTLKAS
TDLNKYVNRRGWVAFGWLDHLTLTGGGTFDAQGEVSWPFNKCPTQKNCNPLPSSLIIVNT
NNTVVKDITTVNSKFFHIVLMNNNNFKGSGITIKAPVNSPNTDGIHLESNSGVTLSNSHI
GTGDDCVSIGQGNSFVTISGIACGPGHGISIGSLGRYNTEKDVKNIIVRDSTFVDTVMGV
RIKTWENSPVQTTVQNVTFENLIMKNVGSPVVVDQTYCPFAYCDHSASSRVQLKDIKFKD
IRGTAAYREAMILKCSKGLPCQGLKLENIDLTSSGLYQAMSVCLDVRAQFSGKINPEPCK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagcagtcggcgccggtgaaacgatctcgatgtctgtggggaggcaactac
ggcgagaaggaggcgcgagggacggagtcagagccgcaggggattagggttcttgccttc
tcggtgggaaggcttttaaagcggctattggatcacgtggagggttgtaaagttcagagt
attattaataatacttttccgcaggaagaacggaggggagcgccatgttgtcgccatggc
gaggaaagcgtttgcgatgatcaagcagcgccccctactcgcctctcaattcgaggcagc
cgagcagtggcgagggcgagcggaacttacaatgtgagggatttcggtgccaagggcaac
ggcgtgactgatgacagccaggcatttatggaagcatggaaaaaagcttgtgcatcatct
ggacgaacaaaggttttggttcccgctggaacatacttcctcaaccctatcgaattcagt
ggcccttgcaaagatgtcaatgacctgatattccagtttcatggaacattgaaagcgtcg
acggacttgaacaaatacgtgaatcgtcgtggttgggtggcgttcggatggctagaccac
ttgaccttgactggcggagggacgttcgatgctcaaggagaagtgtcttggccattcaac
aaatgcccaacacagaagaactgcaatccactaccatcgtcactcatcattgtaaacacg
aacaacactgttgtcaaggatataacaactgtgaacagcaagttcttccacatagttttg
atgaataacaataactttaaaggcagtggaatcacaatcaaggccccagtcaatagccct
aacaccgacggtattcacctagagagtaattccggagtgaccctttccaattctcacatt
ggcacgggtgatgactgtgtctccattggacaaggcaactctttcgtcacaatcagtggg
atcgcttgtggtcctggccatggcattagtattgggagcttaggaaggtacaacactgag
aaggatgtcaagaatatcattgtgagagatagtactttcgttgacacggtgatgggagtg
cgcatcaagacttgggagaactcgcctgttcaaactacagttcaaaatgtaacctttgaa
aatctcatcatgaagaatgttggaagccctgtagtcgtcgaccaaacttattgccccttt
gcctattgcgaccactcggcatcttcgcgtgtgcaactaaaagacatcaagttcaaagac
attcgaggaacagcagcatatagggaggcaatgatattaaaatgcagcaaagggctaccg
tgccaagggcttaagctcgagaacatcgacctcacgagttcaggtctctaccaggcaatg
tctgtctgtcttgatgttcgagctcaattttccggcaaaatcaaccctgaaccatgcaag
tga
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