Zingiber officinale (ginger): 122011119
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Entry
122011119 CDS
T08725
Name
(RefSeq) alpha-L-fucosidase 1-like
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00511
Other glycan degradation
zof04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
122011119
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
122011119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122011119
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
122011119
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122011119
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
GHL6
RRM_ACIN1
2L_N_poxvirus
Motif
Other DBs
NCBI-GeneID:
122011119
NCBI-ProteinID:
XP_042423485
LinkDB
All DBs
Position
1A:complement(150583006..150584935)
Genome browser
AA seq
484 aa
AA seq
DB search
MVRRSAWFWIMAFLHLCHLSLSNSATPPPPVLPVPSASQLHWQRREVIMFFHFGMNTFTD
AEWGTGAESPSLFNPTGLNANQWMDAAEAAGASLVILTAKHHDGFCLWPSQYTDHSVAKS
PWKGGKGDVVGEFANAARSRGIDVGLYLSPWDRHEKTYGREKEYNEFYMAQLHELLTKYG
SISEIWFDGAKGEGATEMNYHFQDWFQMVKQLQSSINIFSNAGPDLRWVGDESGSAGDPC
WSTINRSLLRIGDASLLSYLKTGDPQGADWVPAECDVSIRPGWFWHKNETAKSVSQLLEI
YYNSVGRNCVLLLNVPPNTTGLVSGDDTQRLKDFRAAITRIFSNDLATGSAATASSEWGG
PGGGFAAANVLDSDDQTFWAADGSEQQGAHWIELALPAAKASFNVVRIQEAIALGQRIME
HEVYADGVLVAQGMTVGHKRLHRLTTSVTAARVKIRITKSRGTPLLSAIGLHYDPSVDGP
GEFN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggcgcagcgcgtggttttggatcatggccttccttcacctgtgccatctcagc
ctctccaactccgcaacgcctccgccgccggtgctgcccgtcccgtcggcgtcgcagctc
cattggcaacgtcgggaggtcatcatgttcttccacttcggcatgaacaccttcaccgac
gccgagtggggcacaggcgccgagagcccctcgctcttcaacccgaccggtttgaatgcc
aaccagtggatggacgccgccgaggctgccggcgcctcactggtcatactcaccgcgaag
caccacgatgggttctgtctgtggccgtcgcagtacactgatcactcggtggcgaagagc
ccgtggaagggaggcaagggagacgtcgtcggggaattcgccaacgctgccaggtctcga
gggatcgacgtcgggctgtacctctcgccgtgggatcgccacgagaagacctacggccgg
gaaaaggagtacaacgagttttacatggcccagctccatgaattgctcaccaagtacggg
agcatttcggagatatggttcgatggcgcgaagggggaaggcgcgactgagatgaactac
cacttccaggactggttccagatggtgaagcagctgcagagctccatcaatatcttctcc
aacgcagggcccgacctacgctgggtcggagacgagtcgggaagcgccggagacccctgc
tggtccaccatcaatcgtagcttgctcaggatcggagatgcgagtctcctaagctacttg
aagaccggcgatccgcaaggcgcggactgggtgccggcagagtgtgacgtgtcgatccgg
ccagggtggttctggcacaagaacgagacggccaaatcggtgagccagctcttggaaatc
tactacaattccgtggggcgtaactgcgttctgctgctcaacgtacccccaaacaccacc
ggacttgtctccggcgacgacacgcagcggctgaaggacttccgcgcggcgatcactcgc
attttctcaaacgacctcgcgacgggaagcgcggcgacggccagcagcgagtggggcggt
ccgggcggcggcttcgcagccgccaacgtgctcgactccgacgatcagaccttctgggct
gccgacggaagcgaacagcagggcgcgcactggatagagctcgcgctgccggcggccaaa
gcgagcttcaacgtggtgaggatccaggaagcgatcgcgttgggacagaggatcatggag
cacgaggtgtacgccgacggcgtgctggtggcccaagggatgacggtggggcacaagcgt
ctccaccggctcacgacgtcggtgacggcggcgcgggtgaagattcggatcaccaagtcg
cgcgggactccgctgctgtcagccatcggcctgcattacgacccctcagttgacggccct
ggggaattcaattaa
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integrated database retrieval system