Zingiber officinale (ginger): 122011286
Help
Entry
122011286 CDS
T08725
Name
(RefSeq) two-component response regulator ORR21-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122011286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122011286
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122011286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Rotavirus_VP3
Motif
Other DBs
NCBI-GeneID:
122011286
NCBI-ProteinID:
XP_042423607
LinkDB
All DBs
Position
8A:complement(133892447..133897799)
Genome browser
AA seq
520 aa
AA seq
DB search
MQSESDLVAHGGTESSMKNAFPLGMRVLAVDDDRACLRMLETLLGQCGYRVTAVQHAMAA
LELLRGNKGYYDLVITDVEMPDMDGFQLLEIIGLEMDLPVIMLSINSETSYVMKGVLHGA
VDYLVKPVRIEELKLIWKHVIRKALSDKKGSNELIDNNNDIKAHKDECLRISNPCINEVN
KGEDCAHEIAKHKRRVSGGEIAKHKRRVSWSTDLHLRFIAAVRTLGVDRALPKKILELMN
VEGLTRENVASHLQKYRKTLERNDGCHFNGLSVDSSSSVFSSFCQQAHAKKSSCKKFRLG
EYQEDKVIASSDPPHTSFGSSVSSPYRQFASHSQANLRPEYLWFPSDFSSPELTYESSRL
DVFSYPSLTSTSDPVDICPTTQTSTGNQDLNSYSQFHCPSNQFSVWTSLYNNIELNDSAH
LNTELLSDIGIATVAGGDIVDMQMFGEVNFNYTYHLESTKNQSEDSPTEMLFHLDRCSSE
DDLNTILKQQCPVAAQFSVLVGNMNLYEYVFTSKLSRRFA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcagtctgaaagcgacctcgtggcgcacggaggcactgaatcctcgatgaagaacgcg
ttcccgttggggatgcgagtgctggcggtggacgatgacagagcttgcctcagaatgctc
gaaaccctactcggacaatgcggatatcgagtgacagcagtccaacacgcaatggcagct
ttagaacttttaagagggaacaaaggctactatgaccttgtgataactgatgttgaaatg
cctgacatggatggcttccagcttttagaaattattggtcttgagatggacttgcctgtg
atcatgttatccatcaattctgaaaccagctatgtaatgaaaggtgtacttcatggggct
gttgactacttggtgaaacctgtaaggattgaagaactcaagctcatttggaaacacgta
atcaggaaagcactatcagataagaaggggagtaatgaactgatcgacaataacaatgat
attaaggcacataaggatgaatgtttgaggatttcaaatccatgcatcaatgaagtaaac
aagggcgaagattgtgctcatgaaatagcaaagcataaaagaagggtctcaggtggtgaa
atagcaaagcataaaagaagggtctcatggtccactgatttgcatttacgtttcattgca
gctgttagaactttaggcgttgacagggctttacctaagaagatacttgaactcatgaat
gttgaaggactcactcgagagaatgttgcaagtcatttacagaagtacagaaaaactctg
gagaggaatgatgggtgccattttaacggcctcagtgtggattcttcaagttctgttttt
tcatccttttgccagcaagctcatgctaaaaaaagttcttgtaaaaaattcagattgggt
gagtatcaggaagataaagtgattgcttcatcagatcctccccatacttcctttgggagc
tctgtctcttcaccgtaccggcaatttgcttcacactctcaagcaaacttgaggccagaa
tatctttggtttccctctgatttctcaagtccagaattgacttatgaatcatccaggctt
gatgttttcagctatccatccctaacttcaacatctgatccagttgatatttgtccaact
actcagaccagtacgggcaatcaagacctgaattcatattcccagtttcactgtccatct
aaccaattttctgtgtggacgtcattatacaacaacatagaactcaatgactcagcacat
ctgaatacagaactgttatctgacataggtattgcaacagtggcaggaggcgacattgtg
gacatgcagatgtttggcgaagtgaatttcaactatacttatcatttagagtcgactaaa
aaccaatctgaggattcaccaacagaaatgctgttccatcttgaccgatgcagttctgaa
gatgaccttaatactattcttaagcagcaatgtcctgttgctgctcaattctcagtgcta
gtcggcaatatgaacttgtacgagtatgtttttacgtcgaaactatcaaggagatttgct
tag
DBGET
integrated database retrieval system
