Zingiber officinale (ginger): 122011326
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Entry
122011326 CDS
T08725
Name
(RefSeq) polygalacturonase ADPG1-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Module
zof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122011326
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122011326
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122011326
NCBI-ProteinID:
XP_042423646
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Position
8A:complement(137405056..137407211)
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AA seq
365 aa
AA seq
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MAILFLLPPIALPATFDVINYGAIGDGKTDDSQAFLRAWAAVCKDASATPSVLNIGFKTF
LINAVLNFMGPCKPSSITVQITGVIVAPGTGIIDGKGQAWWDKCRSGCILGPAQVLMNGC
NNLVVKGLKLVNSQRSHLAITNCNDVLLSQLTITSPGDSPNTDGIDVSNSRRIRIEWSTI
ATGDDCIAINRGTYQINITGIACGPGHGISIGSLGKDKSSSEEVTDVIVKQCNFTRTTNG
VRIKTWQGGVGFASRIIFEDINFISTRNPIIIDQTYCDKPYGYCKNVPGAVKVTGVTYQR
MHGTSPDPVAVTLTCSPLAPCSGIVMKEVMIRRDDGGATSSFCSNALGSIGKECQPKVNC
LTTTS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcgattctcttccttcttcctcccatcgctttgcctgctaccttcgacgtgatcaac
tacggtgccattggagacggcaaaacagacgattctcaggcatttttacgagcatgggcg
gcggtctgcaaagatgcatcagcgacgccctctgttctaaacatcggattcaaaactttc
ttgatcaatgctgttcttaacttcatgggcccatgcaagccttcctccatcactgtccag
ataactggagttatagtagccccgggaacaggaatcatagatggtaaaggtcaagcttgg
tgggacaagtgccgaagtggttgcattcttggccccgcccaagttttgatgaacggatgt
aataatttggtggtgaagggtttgaagctggtgaacagccaacgatcgcatttggccatc
accaactgcaacgatgttctgttgtctcaactaaccatcacttcgccgggggatagcccc
aacactgacggcatcgacgtctccaactctcgtcgaatccggatcgaatggtcaaccatc
gccacaggcgatgactgcatcgccatcaaccggggcacctaccaaatcaacatcaccggg
attgcttgcggccccggccatggcataagcatagggagcttaggaaaggataaaagctcg
tctgaggaagtgacggatgtgatcgtgaagcagtgcaattttacgagaaccacgaacggc
gtacgaatcaagacatggcagggcggagtgggttttgcaagtagaatcatattcgaagac
atcaacttcatttctacccgaaatcctatcatcatcgatcaaacttactgtgacaagcct
tatggatactgcaagaacgtgccaggtgcagtgaaagtgacaggagtgacgtaccagcgg
atgcatggcacatcgccagatccggtggctgtgacattgacctgcagccctttggctcct
tgctccggcattgttatgaaggaagtgatgattaggagagatgacggtggcgccacctcc
tccttttgtagcaacgccttgggatccatcggcaaagaatgccagcctaaagtcaattgc
ctgacaaccacctcctaa
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