Zingiber officinale (ginger): 122011413
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Entry
122011413 CDS
T08725
Name
(RefSeq) probable BOI-related E3 ubiquitin-protein ligase 3
KO
K19042
E3 ubiquitin-protein ligase BOI and related proteins [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122011413
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122011413
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122011413
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
Prok-RING_4
TruD
Motif
Other DBs
NCBI-GeneID:
122011413
NCBI-ProteinID:
XP_042423738
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Position
8A:35370735..35371906
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AA seq
231 aa
AA seq
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MDQSAMQLGDAGPAAGATAGPLLPFCDSPALVSSDSGVFFPSASRKRPREDFSSSSSSSS
SHVHRLLLDLDRLVVDHVARLRTELVGRLRRILAAAEEGASKRLRAKEEEVELARKVALA
LEERLKSLSIENQMWRELARSGEAAVCALRADLDRALAEAATADAESCCRGDSAAAVAAR
RACRCCGEMEPTVLLLPCRHLCACAVCGPAAAACPVCDSRKNGHVLVNMSD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggatcaatcagccatgcaattgggagacgccgggccggccgccggagcgaccgccgga
cctttgctccccttctgcgattcccctgcgctggtgagctctgatagtggtgtcttcttc
ccctcggcgtctaggaagcggccgcgcgaggacttctcctcctcctcctcctcctcctcc
tcccacgttcaccggctgttgctcgacctcgatcgcctcgtcgttgatcatgttgcaagg
ttgaggaccgagctggtggggcggctgaggcggatcctggcggcggccgaggaaggggcg
tcgaagcggctgagggcgaaggaagaggaggtggagctggcgaggaaggtcgccttggcg
ctggaggagcgcttgaagagcctctccatcgagaaccaaatgtggcgagagctggcgcgg
agcggcgaggcggcagtctgcgcgctgcgtgccgacctcgatcgggctctggcggaggcg
gcgacggccgacgccgagtcctgctgccgtggcgacagcgcggcggcggtggcggcgagg
agggcgtgccggtgctgcggggagatggagccgacggtgctgctgctcccctgccggcac
ctctgcgcctgcgccgtctgcggcccggcggcggccgcctgccccgtctgtgatagccgg
aaaaatggccacgtgctcgtcaacatgtccgattaa
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