Zingiber officinale (ginger): 122011498
Help
Entry
122011498 CDS
T08725
Name
(RefSeq) syntaxin-121-like
KO
K08486
syntaxin 1B/2/3
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122011498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122011498
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122011498
Membrane trafficking [BR:
zof04131
]
SNARE
Syntaxin (Qa)
Stx-PM
122011498
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
122011498
Exosomal proteins of other body fluids (saliva and urine)
122011498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Fusion_gly
DUF6480
VirB8
Motif
Other DBs
NCBI-GeneID:
122011498
NCBI-ProteinID:
XP_042423824
LinkDB
All DBs
Position
8A:50211624..50212740
Genome browser
AA seq
283 aa
AA seq
DB search
MDGSNLDQILQDADAIEEELGEVERLHQRLRESNEAGKALLDASAVRALRLRMDADTTIA
LKKAGLIKLRLQSLERTDASGGSADRSRATVVAGLRHKLRASVAAFAELRRAVSVEYREI
LARRYFTLTGEAADEATVEALVAAGEGERLLQQVIEERRGQGLGADVVAEIQERRGAAEE
LERNLVELQRLFVDMAVSVGAQGLQMDDIEANVGRANSFVRHGAEELGAAQQQRRSTRNW
AFIAAVILAIVILVAILAVVLTLAANNRKILSFSLFSLSATLF
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggacggatccaacctcgatcagatcttgcaggacgctgacgccatcgaggaggagcta
ggggaggtggagcggctccaccagcgcctgcgcgagtccaacgaagccggcaaggccctg
ctggatgcctcggcggtgcgcgccctccgcctccgcatggacgccgacaccaccatcgcc
ctcaaaaaagccggcctcatcaagctccgcctccaatcgttagagcgcaccgatgcctcc
ggcggctccgcggaccgttcccgcgccaccgtcgtcgccggcctccggcacaagctccgc
gcttccgtggccgctttcgcggagctccgccgcgcggtctccgtcgagtaccgggagatc
ctggcgcggcggtacttcaccttgacgggggaggcggcggacgaggcgacggtggaggcg
ctggtggcagcaggcgagggcgaacggcttctgcagcaggtcatcgaggagagacgcgga
cagggactgggggccgacgtggtggcggagatccaggagcggcgcggcgctgcggaggag
ctggagcgcaacctggtggagctgcagcggctattcgtagacatggcggtgtcggtaggg
gcccagggtctgcagatggacgacatcgaggcaaacgtcggccgcgccaactcctttgtc
cgccatggcgcggaggagctcggcgccgcccagcagcagaggaggagcacccgcaattgg
gctttcatcgccgccgtgatcctcgccatcgtcatcctcgtcgcaatcctcgccgtcgtg
ctgactctcgccgcgaataataggaaaatcttgagcttctcactcttctctctatctgct
actcttttttaa
DBGET
integrated database retrieval system
