KEGG   Zingiber officinale (ginger): 122011719
Entry
122011719         CDS       T08725                                 
Name
(RefSeq) cyclin-T1-3-like
  KO
K15188  cyclin T
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122011719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zof03021]
    122011719
Transcription machinery [BR:zof03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     122011719
    Brd4/P-TEFb complex
     122011719
    7SK RNP complex
     122011719
SSDB
Motif
Pfam: Cyclin_N CycT2-like_C Cyclin_C Cyclin_C_2
Other DBs
NCBI-GeneID: 122011719
NCBI-ProteinID: XP_042424023
LinkDB
Position
8A:complement(333047..361410)
AA seq 576 aa
MAGDFSLHEMADDSPFRSSHDRHEEVKLPGATWYLSRKDIEENSPSRQDGIDLKKENYLR
KSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHARNDRRIIATVCMFLAGKVEESP
RPLKDVILVSYEIIHKKDPTAVQRIKQREIYEQQKELILIGERLVLATLGFSLNVLHPYK
PLVEAIKKFKIAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
GEKVWWQEFDVTPRQLEEISNQMLELYEQNRPAPASQGNETEGSSASGVNHRAPAKVPVD
IEEPTTQSGYSQVSRNTAGESACPANSSTYSDQFHSDKHVGSYDGNDHGRQDDQGRHEMK
AGVSGNKITRDGWHHEPTNNPDILASRSNRSEPAAEEFATLSADGMAETRERMFTQSQTT
KVQSPAMDAIKKIDKEKVKAALEKTKRSRADISRKMDHMDEDDLIERELEHGVELAVKDE
RNKQKSHNWSKPSYKQELKSIDITENAEEGELSVDSQEAQLPEPSSKKMKTISSPGKQNH
NIPTSRRLSGIDDLRPSGRLEHVERDHKRFTPGNQV
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggctggagatttttcacttcatgaaatggcggatgacagccccttcaggtcctcccat
gacaggcatgaggaagttaaactgccgggcgctacttggtatttgagccggaaggatatt
gaagaaaactccccatccagacaagatggcattgatctcaagaaagaaaattatctccgg
aagtcttactgcacatttcttcaggatttaggcatgagattgaaagtacctcaagtaacg
atagctacagcaattgtattctgtcaccgtttttttcttcgccaatctcatgcaagaaat
gatagaagaatcattgctactgtttgcatgtttttggcgggaaaggtagaagaatcacca
aggccattaaaggatgtcattcttgtttcttatgagattatccacaaaaaggatcctact
gctgttcaaagaatcaaacaaagggaaatatatgaacagcaaaaggaactgattttgatt
ggggagcgtttggtacttgcaactctaggttttagcctaaatgtgctacatccatacaaa
cccctagttgaagcaatcaagaagtttaagattgctcaaaatgctcttgcacaagttgca
tggaattttgtcaatgatgggctgcgaacatcgctttgcttgcaatttaagccccatcat
atcgcagccggtgcaatcttcctggctgccaagtttcttaaagtaaagcttccctctgat
ggtgagaaggtctggtggcaggaatttgatgttactccgcggcagttggaagagataagc
aatcaaatgttggaactatatgaacaaaaccgcccagcaccagcatcccaaggaaatgaa
actgaaggcagttctgctagcggcgtgaatcaccgagctccagcaaaagtccctgtcgat
atcgaggagcctactacacaaagcggatattctcaggtgtctagaaatactgccggggag
agtgcttgccctgcaaactcatccacttactctgaccaatttcactcggacaagcatgtt
ggaagttatgatggtaatgatcacggaaggcaggatgatcagggaaggcatgagatgaaa
gccggagtttctggaaacaaaataacaagggacggttggcatcatgaacccactaataat
ccagatattctagccagtaggtccaacagatctgaaccagcagcagaagaatttgcaact
ctttccgcagatggtatggccgaaacaagggagaggatgttcacccagagtcaaactacc
aaagtccagtcacctgcgatggatgccataaagaagattgacaaagagaaagtgaaggcc
gcattggagaaaacaaaaagatctcgggccgatatctccagaaaaatggatcacatggat
gaagatgacctcattgagagagagttggaacatggtgtggaattagctgtcaaggacgaa
cgaaacaagcagaagagccacaactggtccaaaccttcatacaagcaagaactcaagagc
attgatattacagagaatgccgaagaaggtgagctctctgtggatagccaagaggctcag
ttaccagagccgagcagcaagaagatgaaaacaatcagctccccagggaaacaaaatcac
aacatccctacgtcacgccgcctgagtggcattgatgatttacgaccatcaggaagactg
gagcatgttgaacgagatcacaaaaggttcacgccgggaaatcaagtatga

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