Zingiber officinale (ginger): 122011879
Help
Entry
122011879 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122011879
04121 Ubiquitin system [BR:
zof04121
]
122011879
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122011879
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122011879
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122011879
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
Zn_ribbon_GTF2H2
zf-C3HC4_3
zf-RING_5
Zf_IFT144_1st
Rad50_zn_hook
zf-Nse
C1_2
zf-RING_16
CxC4
SPO74
PGA28-like_dom
zf-C2HC_2
DUF8054_C
Motif
Other DBs
NCBI-GeneID:
122011879
NCBI-ProteinID:
XP_042424233
LinkDB
All DBs
Position
8A:complement(2526844..2529058)
Genome browser
AA seq
299 aa
AA seq
DB search
MSRANTHWCYVCRQAIRPLGTTMICPNCDRGFVQDLNELDGSPLDYLGEDYNNHSDNHFG
ILDALSALMRQHMGGLNREFDVNSRSNAPTGIEIVFDGGHGLGTRRVNIGDYLLGSGFDN
LIEQLTRNNSRGPPPASQSAIDSMPTVKISKRHLRGDSHCPVCKDRFELGSEAREMPCKH
IYHSDCIIPWLVHHNSCPVCRHQLPSHGSDHIPTRNHHSGGSGSSNSNSGRESGGEGHAR
RNNSNSSRESGGEGQTRRNPSSTRPSQTANPTSSNANESSGSGSDGIHELHYTGWPFDY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagcaaatacacactggtgttatgtttgcaggcaagcaattcggccacttgga
acgaccatgatctgcccaaactgtgatagaggattcgtgcaagacctgaatgagctagat
ggaagcccacttgattacttgggggaggactataacaatcacagtgataatcattttgga
attctggatgctttgtctgccttgatgagacagcatatgggaggactgaatcgggaattt
gatgttaatagcagatccaatgctccaacagggattgagatagtcttcgatggaggacat
ggacttggtacaaggcgtgtcaatataggtgactatcttcttggttctggattcgataac
ctcatcgaacagctcactaggaacaacagtcgcggcccaccacctgcttctcaatcagca
attgactccatgcccactgtaaagataagcaagaggcatctccgtggtgattcacactgc
cctgtttgtaaagacagattcgagttgggatctgaagcacgggaaatgccctgtaagcat
atatatcactccgactgcattattccatggctagtccatcacaattcttgcccggtttgt
cggcatcagttgccatctcatggctctgaccatatcccgactagaaaccaccatagtggt
ggcagtggaagcagcaacagtaacagtggcagagaatctggtggtgagggccatgccagg
aggaacaacagcaatagtagtagggaatctggcggtgagggccaaaccaggaggaatcct
tcctccactcggccatcgcagactgctaatcctactagctctaatgcaaacgagtcgagt
gggagcggcagtgatggtattcatgaactccattacactggatggccttttgattattaa
DBGET
integrated database retrieval system
