Zingiber officinale (ginger): 122012017
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Entry
122012017 CDS
T08725
Name
(RefSeq) WD repeat-containing protein 11-like isoform X1
KO
K24260
WD repeat-containing protein 11
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122012017
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zof03037
]
122012017
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Others
122012017
Cilium and associated proteins [BR:
zof03037
]
Other cilia and associated proteins
Other cilium assembly proteins
122012017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR11_2nd
TPR_WDR11
Beta-prop_WDR11_1st
WD40_CDC20-Fz
TPR_GEMI5
WD40_Prp19
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
122012017
NCBI-ProteinID:
XP_042424398
LinkDB
All DBs
Position
8A:complement(4280193..4302679)
Genome browser
AA seq
1325 aa
AA seq
DB search
MASRSPRGARSHDAWDCLLPGPPSRSNGGAADCSNFGLLAYGAGSCVVVADPRSMQLVCI
LPMPPSPAASASAHASLAPFVTSVRWTPQPLLRDLSSHEDPFTSHLRLAAGDRQGRIAIW
DLRSRQVLLWLDLEASSSSSSGRMGIQDLCWVRSDSWLLAAIHGPSLLVLWDTVTGRCLW
KYDASPEYFSCIRRDPFDARHFCTLGLRGFLLSAIALSGGDGGSVSMQDHRITGISDSSS
DLQKLEKDSSGSASSLSPAHALFPLFFARLCFSPVSKSILVATFPKELIVFDLNYGTTLS
AIPLPRGFSKFMDLVPDQDRDLLYCAHVDGKLSIWKRKEGEQLHILCGMEELMPSIGTSV
PTPAVLALTLRQSESSVQNIGRVFTNPSDIQTSLVEDPSNSQASLAEDDTLSKILNKEID
AALKTCLISISDDGKIWNWLLTSERDVSDSTKEQVSGNGTNSPSITLKLTEPVSMKISLM
GQLHLLSSTLTTLAVPSPSLTATLARGGNNPAPAVPLIALGTQGGTIDVVDISASAVAVS
FSVHNNPIRGLRWLGNSRLVSFSYGQVNDKGGGFTNRLVVTCLRSGLNRPFRLLQKPERA
PIRALRASSSGRYLLILFRDAPVEVWAMTKTPIMLRSLALPFTVLEWTLPSAPRPIQSGP
SRESLASKEQISTPNTSANTSSTESKVANSDSTVDDTSESFAFALVNGALGVFEVHGRRI
RDFRPKWPSTSFASSDGLITAMAYRLPHVVMGDRLGNIRWWDVTTGLSSSFNTHREGIRR
IKFSPVVPGDRSRGRIAVLFYDNTFSIFDLDSSDPLANALLQPQSPGTLVLELDWLTRRT
DRNEPLVLCIAGADSSLRLIEVNISDTKTGSITKSRVLNERFRPVPLCVPMLFPTAHALA
LRTILQLGVKPSWFILNNATTGILPYQIPDLVPASPSDLRSFMIESTLPSVGDIVVPELL
LKVLEPYRREGCILDEERVGLYASLVNKGSAARFAFAAAIFGELSEALFWLQLPHALSHL
LERSENKSQQSSKPASISEAESALLNRIASRERSAGSITSEAVKYGQLNMMAFSQEELWG
KANEQIAWHAKLDGEEAIQKRVHELISVGDLEAAVALLLSTPPEGSQFYPNALRAVALSS
AVSRSLHELAVKVVAANMVRTDNSLSGIHLLCAVGRYQEACSQLQDAGCWTDAATLAATH
LRGSDYSRVLQRWAGYVLHSEHNIWRALILYVAAGALVEAFAALRDARQPDTAAMFLLAC
HEIYSQASPNSQTDVETSITVDEKQSFQLPLRNLVDEDIKAISEFYGEYQRKLVHLCMDA
TPTFD
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaggtcgccgaggggagcgcgatcacacgacgcctgggattgcttactacca
ggcccgcccagccgcagcaacggcggcgccgccgactgcagcaatttcggcctcctcgcc
tacggtgccggaagctgcgtcgtcgtcgcagaccctcgatccatgcagctcgtctgcatt
ctgcctatgcctccctctcccgccgcctccgcctccgcccacgcctccctcgccccattc
gtcacctccgttcgatggaccccccagcctctcctccgcgacctgtcctctcacgaagac
cctttcacctcccacctccgcctagccgctggtgatcgacagggccgcatcgccatatgg
gacctccgatcccgccaggtcctactctggctcgacctcgaggcatcgtcttcctcttcc
tccggccggatgggaatccaggatctttgctgggtacgctccgactcctggcttctggcc
gcgatccatggtccgtcgcttctcgtcctttgggacaccgtcaccggccgctgtctgtgg
aagtacgatgcctctcctgagtatttctcctgcattcgccgcgatccctttgacgcaagg
cacttctgcacccttggcctccggggcttccttctctcggccattgccttgagtggcggg
gacggtggttccgtctctatgcaagatcatcggatcactgggatttctgattcatcctcc
gatctgcaaaagctcgagaaggactcctctggatctgcttcttcattgtctccagctcac
gctctcttccctcttttctttgcaaggctttgcttctcgcccgtatcgaagtccatcctc
gttgcgaccttccccaaggagcttattgtttttgacctgaattatgggacgacactgtcg
gccattccactgcctcgtggattcagcaagtttatggacttggtgccagatcaagatcgc
gatctgctttactgcgcacatgttgatgggaagctcagtatctggaagaggaaagaagga
gagcaattgcatatactctgtggaatggaagaattaatgccctccattggcacatctgtc
ccaactccagccgttctcgcactcactcttcgccaatcagaatcttcagttcaaaacatt
ggccgtgtcttcaccaatccatcagacatacaaacttcacttgtcgaagatccatcaaac
tcacaagcctcacttgctgaagatgacaccctttctaaaattttaaataaggaaattgat
gctgctctgaagacatgtttaatctcgatttctgatgatgggaaaatctggaactggctt
cttacttctgaaagggatgtatcagattctactaaagaacaagtttctggcaatggaacc
aattctccatctataaccctgaaactcactgaaccagtgtctatgaagatcagtttgatg
ggtcagctccatcttctttcttcaacattgaccactctagctgtaccatccccatcattg
acagccactttagctcgtggaggaaataatcctgccccagccgttccactcattgctttg
gggacacaaggtgggactattgatgttgttgatatttctgctagtgcagttgcagtgagc
ttttctgtccataataatcctatcagagggctgcgatggcttggaaattcaaggcttgtt
tccttctcatatggtcaggtaaatgacaaaggaggaggcttcactaatagacttgttgtc
acttgcctaagaagtgggcttaatcgcccatttaggctccttcaaaagccagagcgcgcc
cccataagagcattaagagcctcttcatctggaaggtatcttctcattttgtttcgggat
gctccagttgaggtatgggctatgacgaagacacccattatgcttagatcattagctctt
ccatttactgtgttggaatggacattaccaagtgcaccccgccctattcagagtggccct
tctcgggagtccttggcatcaaaagaacagatatccactccaaatacaagtgcaaataca
tcgtctactgaatctaaggtggcaaactcagactctactgtggatgacacatcagagagt
tttgcatttgccttagtgaatggtgcccttggtgtgtttgaggtccatggccggaggatt
agagattttagaccaaagtggccatcaacctcatttgcttcatcagatggtctaatcact
gctatggcatatcgtctcccgcatgtggttatgggggatcgattaggtaacatacgctgg
tgggatgtgactactggtctttcttcttcatttaacacccacagagaaggaattagaagg
attaagttttctcctgttgttcctggagatcggagcagagggcgtattgctgtactcttt
tatgacaatacattctcaatatttgatcttgactcgtcagatccattggccaatgccctt
ttacagcctcaatctcctggaacgcttgttttggagcttgattggctgacaagacgaaca
gacagaaatgaaccactggttttatgcatagctggagctgacagtagtcttcgccttatt
gaggttaatataagtgacacaaagactggttcaatcacaaagtccagagtgttaaatgag
agatttcgaccagtacctttgtgcgtacctatgttatttccaacagcacatgcactggca
ttacggacaatcttgcagcttggcgtgaaaccttcttggttcattttgaacaatgcaacc
acaggtattcttccatatcagattcctgatctggtcccagcatctccaagtgacctgcga
agctttatgatcgagtcaactcttccctctgtgggtgatatcgttgtgcccgaattactt
cttaaggttctagagccatatcgaagagagggatgcattcttgatgaggaaagggttggg
ttatatgcttcattagtcaacaaaggttctgcagcaaggtttgcctttgctgctgctatt
tttggtgaactttcggaagcgctgttctggttacagctaccacatgccctcagtcatttg
ctggaaagatctgaaaataaatcacagcaaagctccaagcctgcatcaatttctgaggct
gaaagtgctcttcttaatcggatagcatcacgtgaaaggtctgcaggctcaataacatca
gaagcagtgaagtatggacagctaaatatgatggctttcagccaagaggaattgtgggga
aaagcaaatgagcaaattgcttggcatgcaaaactagatggagaagaggcaattcaaaag
cgtgttcatgaacttatctctgttggagacttggaagcagctgtagctttgctactctcg
acaccaccagagggatctcagttttatccaaatgctttacgagcagtggcattgtcttct
gctgtgtcacggtctttgcatgagcttgctgtaaaggttgttgcagcaaatatggtaagg
acagataactcactgtcaggaatccatcttctctgtgctgttggaagatatcaagaagca
tgttctcagttacaagatgctggatgttggacagatgctgctactttagccgcaactcat
ctacgtggatctgactattcaagggtcttgcaaagatgggctggttatgttttgcatagt
gaacataacatttggagagccctgattttgtatgttgctgctggagctctcgtggaggcc
tttgcagctctacgtgatgctcggcaaccagatacagctgcaatgttcttgcttgcatgc
catgagatctattcacaagcatcaccaaatagtcaaactgatgttgaaacatcgataact
gtggacgagaaacaaagttttcaattgcctctaaggaatttggtagatgaggatatcaaa
gcaattagtgagttctatggagaataccaaagaaagttggtgcacctttgcatggacgca
acaccaacgtttgattga
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