Zingiber officinale (ginger): 122012095
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Entry
122012095 CDS
T08725
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 15a-like isoform X1
KO
K14972
PAX-interacting protein 1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122012095
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
122012095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KIX_2
Med15_C
KIX
Motif
Other DBs
NCBI-GeneID:
122012095
NCBI-ProteinID:
XP_042424477
LinkDB
All DBs
Position
8A:5593079..5609015
Genome browser
AA seq
1308 aa
AA seq
DB search
MEANSWRSTQGEMPDGRSGDWKTQLHPEARQRIVNKIMDTLKRHLPISDSNGLNELQKIA
IRFEDKIYTAAADQSDYLKRISQKMLSMEKKPQHPGGSGQINHSINQNHVDQGPSQSTIS
SVSQPSSIQNMTSISQNSVTNSLGQAAATNIYSTAQRQMQGRQQQQQMISQQQHQSQNQL
LYQQQQFQPQLLKQKLQQSTLPQSHVQQQALLQQTTQLQSSQQPFIAVTSNLQSGHSSIQ
QTQPGAIQSIVQSGLSQNSMSSVQQSGTSLLQQQPQSVSRQQQQSQSNMLQQTPLQHHQT
SASQHSNLAMHQHQQSMCQQSNISNVQQSQLVGQQTSGTDMQQPQRLPTQQNNLLSMQQS
KHLLNQQSMPLHQQQMLGTQTNISGFSLQQQQQQQQQQMLESLSNVSNLQPHQRPMHVLQ
QAKTVVQQQQNQQAPLAMLQAQGQPQNQSLQQQQISHIQSQTAPHQQQLVQQHIGSLQRD
MQQRVPASGSILPQNAMEHQKQFVQSQMGLQEVSSSSTLDSIAPTGIVAVDLQEEIYQKV
KSMKDLYFADLNEFYQWVSLKLQQNDVLPSAKAAEQFQKMNDFKKMLECILQVLKSPKAN
IHPSLKDKIPIYEKQILNILASNKKKGIPSQPHGQQQFQRPSSHSQLVQQQQQTQISQLQ
QHDNYTNQQNNIQSSSNSTQAPAVQGVQHGSVPLSAQFGVTSQQNISNALPTGSTVDPVQ
GNSFSSLQQGAIAPMQQGGLVSAQSSIAQQTNANIMPNASMNSSHNNAIAQQPSSNVMQQ
QHFKQEQQHLMSNPQLKQQLQHRHMQQHLLQQQQKQQLLQAQQPLQQQLQQQQQKQQQTS
QMPLHRIQQLHQSNEVNDLRLRQAPGIKLGHYQQHYSTGQRHSYYQVKPGATVPISSPQN
FQASSPQASHNSSQIDQHCQLSSQIKSGTPLQSANSPFVPSPSTPIDPSPIPCESEKQLS
SFTPLPNVGHVGHQQTAIAPQSQSLAVATPGISASPLLAEFSCPDGNQTTGLNLVPGKAS
TPERPLKRLIELMQSLTPEAWSSAVRDIHSVVSMIDRIASSAPGNGSRAAVGEDLVAMTK
CRLQARSFMSQDGSGPTKRIKRDISSIPLNNISSAGSKNDSLKQSYGLDTSELESTATSC
AKQQKFEVNHALIEEIREINQWLIVTVVNISEEGTDSISAASEGEGTIVKCFFNAVALCP
DLKSQFAKEDMGPILPLRLFVPSNYPKSSPVLLDKVSDEQSRESDDLSVKTRSRFVIYLR
SLSQPMSLGEMVKTWDACAQRVITEYAQQTGGGTFSSRHGAWENCVGA
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgaacagttggaggtcgactcagggggagatgccagatgggagatctggtgac
tggaagacccagctccatcccgaggcgcggcagagaatcgtcaataagataatggacact
ttgaagaggcatcttccaatctctgattctaatggtctaaatgaacttcagaaaattgct
attcggtttgaggataagatatatactgcagctgcagatcagtctgattatttgaaaagg
atttctcaaaaaatgttgtcaatggagaaaaagcctcagcatcctggaggatctggacaa
attaaccattctattaaccaaaatcatgtagatcaaggtcccagtcagtctactatatcc
agtgtgagccagccatctagcatacagaacatgactagcatatcacagaattctgtcacc
aactcattggggcaagctgcagcaacaaatatatattcaactgcgcaaagacaaatgcag
ggaaggcagcaacaacaacaaatgatttcccagcagcagcatcaatcccaaaaccaactt
ctataccaacagcagcagtttcaaccacaattactgaaacagaaacttcagcaatcgaca
ctcccacaatcacatgttcagcagcaagctctgctgcaacaaacaacgcagctgcaatct
tctcaacagccatttatagcagtaacatctaatcttcagtcgggccattccagcattcag
caaacacaacctggagcaatacagtcaattgtacagtctggcttatcccaaaattccatg
agttcagttcaacaatctggcacatccttgcttcagcaacagcctcaatcagtttccaga
caacaacaacaatcacagtctaacatgcttcaacaaacaccgttgcaacaccatcaaact
tcagcttctcaacactctaacttagctatgcatcagcaccagcagtcaatgtgccaacaa
tcaaatatatcaaatgttcaacagtcccagctggtcggtcaacaaacaagtggcactgat
atgcaacaaccacagaggctaccaactcaacagaataatctattaagcatgcaacagtct
aagcatttgttgaatcaacagtcaatgcctttacaccagcaacagatgttaggcactcaa
actaacatttcagggttttctctgcagcagcagcaacaacaacagcaacaacaaatgctt
gaatcattatctaacgtctcaaatttgcagccgcatcagcgccctatgcatgtgcttcaa
caagctaagacagttgtacagcagcagcaaaaccagcaggcacctttggcaatgctacaa
gcacaaggtcaaccccaaaatcaatcattgcagcaacaacagatttctcatattcaatcg
cagactgcaccacatcaacagcagttagtacagcaacatattggttcattgcagagagat
atgcaacaaagagttccagcttcaggttccatacttccccagaatgcaatggagcaccaa
aagcagtttgttcaatcacaaatggggcttcaggaggtgtcatctagttctacactggat
tccatagcaccaacaggaattgttgcagttgatttgcaggaggagatctaccaaaaggtc
aagtccatgaaagatctctactttgctgacctgaatgaattttaccaatgggtttctctg
aagttacagcagaatgatgttctgccatctgcaaaggcagcagaacaatttcagaaaatg
aatgattttaagaagatgttagagtgcatattgcaagtattgaagtcaccaaaggccaat
atccatccaagtctcaaggacaaaattcctatatatgagaagcaaattctaaatattcta
gcttcaaataagaaaaaaggtatcccttcacagccacatggacagcaacaatttcagcgt
cccagtagccactctcaattagtgcaacagcaacaacaaactcaaatttctcaactgcaa
caacatgacaactatacaaatcagcaaaataatattcaaagttcttcgaattcaacgcag
gcacctgctgtgcaaggcgtgcaacatggttctgtgccattatcagcacaatttggtgtt
acatctcaacagaatatctcaaatgcattaccgactggatctacagttgatccagtacaa
ggaaattcttttagttcattacagcagggagcaattgctcccatgcaacaaggtggtctg
gtatctgcccagagttccattgctcaacaaaccaatgctaatattatgccaaatgcctca
atgaattcatcgcacaacaatgcaattgcccagcaaccaagttctaatgtaatgcaacaa
caacatttcaagcaggagcagcagcatctgatgtcaaatcctcaactaaagcaacaatta
caacatcgtcatatgcaacaacatttgctgcagcaacaacaaaagcagcaactacttcaa
gcccaacaacctctgcagcaacagttgcaacagcaacaacaaaagcaacagcaaacctca
cagatgccattgcaccgaatacaacagctccaccaatcaaatgaagtcaatgacttgagg
ttgagacaagcacctggtattaagctaggacattatcagcaacattactcaactggtcaa
agacacagctattatcaagtgaaaccaggtgccactgtcccaatttcatcacctcaaaat
tttcaagcatcatctccccaggcttctcataattcttctcaaattgaccagcattgtcag
ctatcatctcaaataaaatctggaacacctttacagtcagctaactcaccttttgttcca
tctccatccactcctatagacccctccccaatcccatgtgaatctgagaaacaactttct
agcttcacaccattacctaatgtgggacatgttggacatcaacaaacagctatagcacct
caatctcaatctcttgctgttgctacacctggaatatcagcttcacctttgctggcagaa
ttttcatgtccagatggtaatcagactactggtctgaatttagttcctgggaaagcaagt
accccagaaaggcctcttaaacgtttaatagaattgatgcaatcgttaacgcccgaggct
tggagctcagctgttcgtgatattcattctgtagttagcatgatagacaggatagcaagt
tctgcaccaggaaatggttctagagctgcggttggtgaggatttggttgcaatgacaaaa
tgccgtttacaagccagaagcttcatgtctcaagatggaagtgggccaacaaaaagaata
aagcgtgatataagttccattcctttgaataatatttcatctgctggaagcaaaaatgat
agccttaagcaatcatatggtcttgatacatctgaactagagtctactgccacatcgtgt
gctaagcaacaaaaatttgaggtaaatcatgccttaattgaagagataagggagataaac
cagtggctcattgttacagtggttaacattagtgaagagggtactgattcaatttctgct
gcatcagaaggcgaaggaacaatagtgaagtgtttcttcaatgctgtggctctatgtcca
gatttgaagtctcaatttgccaaagaagatatgggtccaattctacctctgaggttattc
gttccctctaattatccaaaatcttcccctgttcttttggacaaggtttcagacgagcaa
agtagggaatccgacgatctttctgtgaagactaggtcaagatttgtcatttatcttcgc
agtctgtcacaaccaatgtcgctaggagaaatggtaaagacatgggatgcatgtgctcaa
agggtgattactgagtatgctcaacagactgggggagggacttttagctcaagacatggt
gcctgggaaaactgcgtaggtgcttga
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integrated database retrieval system
