Zingiber officinale (ginger): 122012152
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Entry
122012152 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122012152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122012152
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122012152
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122012152
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Ortholog
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_4
DUF7567
Motif
Other DBs
NCBI-GeneID:
122012152
NCBI-ProteinID:
XP_042424535
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Position
8A:6668347..6671059
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AA seq
314 aa
AA seq
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MESDSVECVSSIDGLDEDETSPLHPASSKLHPGAATPAGIPAATSVHELLECPVCTNSMY
PPIHQCQNGHTICSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYNSLGCPEI
FPYYSKLKHEAQCSYRPYNCPYAGSECSVVGDIPFLVSHLRDDHKVDMHSGCTFNHRYVK
SNPREVENATWMLTVFNCFGHYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNFSYSVEV
GANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ
QNNDAGVCMPSLCS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatagcgtggaatgcgtgtcgtcgattgacggattggacgaggatgagaca
tcccctctccatcccgcctcgtcgaagctccaccccggcgccgctactcccgctggaatt
cccgctgccaccagcgtccacgagcttctcgagtgccctgtctgcaccaactccatgtat
cccccaatccaccagtgtcaaaatgggcatacaatctgttcaacatgcaaagcgagggtg
cacaaccggtgccctacttgtcggcaggagcttggagacattaggtgcttagcattggaa
aaagtagccgaatcacttgagcttccttgcaaatataattcacttggctgccctgaaatc
ttcccgtactacagcaagctgaagcatgaagcccagtgcagttataggccttacaattgc
ccttatgctggctctgaatgctcagttgtgggggatatcccttttctggtttcacattta
agagatgaccacaaagtagatatgcacagtggttgcacatttaatcatagatatgtcaaa
tccaaccctagagaggttgaaaatgctacatggatgctgactgtatttaactgttttggt
cattacttctgcttgcacttcgaggctttccagctgggaatggctcccgtgtacatggca
tttctgcgcttcatgggagatgagaatgaagcaagaaactttagctacagtgtcgaggtt
ggggccaatggaaggaagctaatatgggaaggtacaccccgaagtattcgtgatagtcac
cggaaagttcgggacagtcatgacggtctcatcattcagagaaacatggctctcttcttt
tccggtggtgataggaaagagctgaaactgagggtcaccggcaggatatggaaggagcaa
cagaacaatgatgctggagtctgcatgccaagtctctgcagctga
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