Zingiber officinale (ginger): 122012179
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Entry
122012179 CDS
T08725
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122012179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122012179
04121 Ubiquitin system [BR:
zof04121
]
122012179
03029 Mitochondrial biogenesis [BR:
zof03029
]
122012179
Membrane trafficking [BR:
zof04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
122012179
Atg8 conjugation proteins
122012179
Ubiquitin system [BR:
zof04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
122012179
Mitochondrial biogenesis [BR:
zof03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122012179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
122012179
NCBI-ProteinID:
XP_042424565
LinkDB
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Position
8A:7150566..7155971
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AA seq
713 aa
AA seq
DB search
MASETSSTPSSSRASAEPSSSSYTAIRDPGRILQFDPFQSLVDEGFWHRLSSLKLDSLGL
DQSPISLTGFYAPCSHSEVSNRLTLLAESLPPDPKQLESPLERVHGNRNRCPVPGTLYNM
NTLESFKALDRVSLLKMEAQKIWDDIHSGKVEEDSAVLLRFLVISFADLKKWNFLHWFAF
PAVVLDPPAMILNIQSAKDALNQDEGQSLSAVMNEWRNSSLTTDVPFFLIIISSSHATVR
HLKDWEACQHDGQKLLFGFYDPSCRATNPGWPLRNYLAFISLRYNIGKIQFFCYREKHGF
ADLGLSLVGEAAVSPPQDWREPQNIPKAVGWQPKPKNIRLAESMDPERLAVSAADLNLKL
MRWRTLPSLDLNILSNVKCLLLGAGTLGCQVARMLMAWGVRKMTLVDSGKVAMSNPVRQS
LYTFDDCLNGGSFKAVAAASSLKQIFPAMEAEGIQLSIPMPGHPILANEVDRVHEDCKQL
WDLISSHDVTFLLTDTRESRWLPTLLCASENKVAITAALGFDSYLVMRHGSGPFITVSDQ
TDNPSALDDGVQRLGCYFCSDVVAPIDSTSNRTLDQQCTVTRPGLAPIASALAVELLVGL
LHHPNGIHAPGEIANSIMSSSKEPLGILPHQIRGSLPQYSQLTLLGHSSNSCTACSSTVV
LEFKRRGIEFVLQAINHPTYLEDLTGLTELMESAKSFNLDWDKETSDDDDADL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggagacctcatcgacgccttcttcgtctcgtgcgtcagcggagccgtcttct
tcctcatacaccgccatccgtgatcctggaagaatccttcaattcgatccgtttcagagc
ctggtggatgagggtttctggcatcgcctctcttccctgaagctagactccctcggcctc
gaccaatcccccatctctctcaccggtttctatgcaccctgttcacattctgaagtatca
aatcgcttgacacttcttgcggaatcattgccgcctgatcctaagcagctagaatcacca
ctcgagagagttcatggtaatcggaatagatgtcctgttcctggaactctttacaacatg
aatacgttggagagcttcaaagcccttgacagagtatctctgctcaaaatggaggcacaa
aagatatgggatgatatacattctgggaaggtagaggaggatagtgctgtgcttttgaga
tttcttgtcatctcatttgctgatctgaagaagtggaacttccttcactggtttgcattc
cctgctgtggttcttgatcccccagcaatgatactcaatattcaatcagcaaaagatgca
ctcaatcaggatgagggacaatccttgtctgcggtaatgaatgaatggcgcaattcaagc
ttaacaacagatgtgccattcttcttgatcatcatatcttcatcacatgccactgttagg
cacttgaaggattgggaagcttgtcaacatgatggtcaaaagttgttatttggattttat
gatccaagttgtcgtgcaactaaccctggatggcctcttcgcaattatcttgctttcatt
agtttgagatataacattgggaaaatccaattcttttgctaccgtgagaagcatggtttt
gctgatttaggtttatctcttgttggcgaagctgcggtctcaccgccacaagactggaga
gaaccacagaatattcccaaagctgtaggctggcagccaaagcccaaaaatataaggctt
gcagaatctatggatccagagaggttggctgtatcagctgcggatttgaacttgaaattg
atgagatggcgtactttaccatctttggatttaaatattttgtctaatgttaaatgtcta
cttctaggtgccggtactcttggttgtcaggttgcccgtatgcttatggcctggggtgtg
aggaagatgacactagtagatagtggcaaagtagccatgtctaatccagtgagacaatct
ttatatacatttgatgactgccttaatggtggcagttttaaagccgttgcagctgcatca
agtttaaaacagatatttccagctatggaagcagaaggtatacaactttcaataccaatg
cctggacatcctatacttgccaatgaagtagatcgtgttcatgaagactgcaagcaactc
tgggacttgatttcttcccatgatgtgacatttttgttgacagacacaagagaaagcaga
tggctcccaacactgctttgtgcaagtgagaacaaagttgctattactgcagctttgggt
tttgatagttacctggtcatgcgccatggatctggtccatttatcactgtatcagatcag
acagacaacccatctgccctagatgatggcgtgcagcggttggggtgttacttctgtagt
gatgttgttgcacctattgattcaacatcaaatcgcacattagaccaacaatgtactgtt
acacgccctgggcttgcacccatagcatctgccctggcagtggagcttttggttggactt
ttacatcatccaaatgggatacatgcaccgggtgagattgccaactccattatgagctcc
agtaaggaaccacttggtattttgccgcatcaaattcgaggttcacttcctcagtactcc
caactgacactccttggccactcatctaatagctgcacagcttgttctagtaccgtggtg
ttagagttcaagaggcgaggcatcgagtttgtactgcaagctattaaccatcccacttac
ttggaggatttaactggactaacagagttaatggaatctgccaagtctttcaatttggac
tgggataaagaaactagtgatgacgatgatgctgatctctaa
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