Zingiber officinale (ginger): 122012255
Help
Entry
122012255 CDS
T08725
Name
(RefSeq) transcription factor GAMYB-like
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122012255
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122012255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_Rap1
HTH_Hrp3
SLIDE
Motif
Other DBs
NCBI-GeneID:
122012255
NCBI-ProteinID:
XP_042424667
LinkDB
All DBs
Position
8A:2698482..2704035
Genome browser
AA seq
551 aa
AA seq
DB search
MNQMQNESGETRIQEDLNDSPSIEEGSSLSSLSGGNRVMKKGPWTTAEDAILLNYVKKYG
EGNWNAVQKHTSLSRCGKSCRLRWANHLRPNLKKGAFTPEEEQLIIELHAKMGNKWARMA
ALMPGRTDNEIKNYWNTRIKRRQRAGLPLYPPNICYQVPEENQQYKNSNEYMFSDKQPND
CFQGSNFEIPDIVLNNFNVNHGSLYNASPFSGIQVNSLLSQSFGPQNCALGNSTSSYMKH
SEKLYPAFPGSISDGHSRFEHMVLEPPGKQLTSILGYPCDPDPRKNLPNFGGAIPGSHAL
LNGIFSVPSPFLGSLDSELPSFQYTETDGSCWPPCSSTLEATDTLGDSPSATISLQSECV
SPRRSGLLEALVHEAQTKSNTNKEPSIILNNVAALDLELESVNEIKLESQSNPPISSLSR
SAGVFSSSTSLISAGSVDEFPYPNILSGSGNMIATENFSCHKVGERGTSFKVDFSRPDSI
LGSVWLEYDSCRVKEHTVLNDSLATLLGQDVCSNYKPVPVPVPVGSSSSLMLGVGLDSYQ
WNKMPHACQMP
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagatgcaaaatgagagcggggaaacaagaattcaagaggaccttaatgattca
ccatctattgaagaaggcagcagcttgagttcactaagtggaggaaatcgggttatgaag
aagggaccttggacaactgcagaggatgcaattttgttgaattatgttaagaaatatggt
gaaggaaattggaatgctgttcagaagcacacaagtctctctcgatgtggcaaaagttgt
cgtctacgatgggctaatcatctcaggccaaatttaaagaaaggtgccttcacaccggag
gaggaacaactgataattgaactccatgctaaaatgggaaacaaatgggctcgtatggct
gcacttatgcctggtcgaactgataatgaaataaagaactactggaatacaagaataaaa
agacgccaacgtgctggtttgcctctataccctcctaatatatgctatcaagttccagag
gaaaatcagcaatacaagaattccaatgaatatatgttcagtgacaaacagcccaatgat
tgctttcaaggaagcaattttgaaattcctgatattgtactgaacaacttcaatgttaac
catgggtctctatataatgcttcgcctttctcaggtatacaagttaatagtctactcagt
cagagttttggaccccagaactgtgccttgggaaattcaacatcgagttacatgaagcac
tccgaaaagctatacccagccttccccggtagtatctctgatgggcattctaggtttgaa
catatggtgctagagcctccgggaaaacaactgacttccatattaggttatccctgtgat
cctgatcctaggaagaacctaccaaattttggaggagcaatccctggtagccatgccctt
ctaaatggcatattctctgttcctagtccttttcttgggtctttggattcggagctccct
tcattccaatatacagaaactgatggtagttgctggcctccatgctcatccactcttgaa
gcaactgatacgttgggtgattctccctcagcaactatttcattgcaatctgagtgtgtt
tcaccaaggcgaagtggtctactggaagcattggttcacgaagcacagacaaaaagtaac
acaaataaagaaccatccatcatactgaacaatgtggctgcactagatctagagctagag
agtgtcaatgagataaagttggaaagccaaagtaatccacctatttcttctttgagtcga
tctgctggtgtcttcagttcgagcacctctctgatcagtgctggttctgttgatgagttt
ccatatcctaacattctttcaggttcaggcaacatgatcgcaactgaaaatttttcttgt
cataaagttggggagagaggcacttcattcaaagtagatttctcaaggccggattctata
ctcggatcagtttggcttgaatatgattcttgtcgtgtgaaggagcacactgtcctgaac
gactcccttgcaacattgctaggtcaagatgtgtgcagcaactacaaacctgtacctgta
cctgtacctgttggatcatcatcttctctcatgctgggagttggactcgactcataccag
tggaataaaatgcctcatgcatgccaaatgccttga
DBGET
integrated database retrieval system
