Zingiber officinale (ginger): 122012406
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Entry
122012406 CDS
T08725
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00071
Fatty acid degradation
zof01100
Metabolic pathways
zof01212
Fatty acid metabolism
zof04146
Peroxisome
Module
zof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122012406
00071 Fatty acid degradation
122012406
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122012406
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
zof01004
]
122012406
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122012406
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122012406
Lipid biosynthesis proteins [BR:
zof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122012406
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of breast milk
122012406
Exosomal proteins of breast cancer cells
122012406
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Fusion_F0
Motif
Other DBs
NCBI-GeneID:
122012406
NCBI-ProteinID:
XP_042424858
LinkDB
All DBs
Position
8A:complement(11009323..11033452)
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AA seq
696 aa
AA seq
DB search
MESAAQRRLRAISGHLIASSDPDKTSNLSINTTVGEFVLAQGYSVVFPEKLQTGKWNVYR
SARSPLKLVSRFAEHPDIATLHDNFEHAVETFRNYKYLGTRIRMDGTVGEYKWMTYGEAG
TSRSAVGSGLIYHGIPRGACIGLYFINRPEWIILDHACSAYSYISVPLYDTLGPDAVQYI
VNHASVEVIFCVPQTLSTLLIFLSQMSSVRLIVVVGGIDEKMPSISSATSVKIITYSKLI
SEGQSNIQRYCPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANAAGSSMSVKFYPSDVY
ISYLPLAHIYERVNQIMVTYFGVAVGFYQGDNLKLMEDMEALRPTLFSSVPRLYNRIYDG
VMNAVKTSGGLRERIFNAGYNAKMQAIANGKSPSPIWDRLVFNKIREKLGGRVRFMTSGA
SPLSADVMDFLRVCFVGLVLEGYGMTETSCVISGMDVGDNLTGHVGSPNPACEIKLEDVP
EMNYTSDDQPYPRGEICVRGPIVFQGYYKDEVQTKEVMDEDGWLHTGDIGLWLPGGRLKI
IDRKKNIFKLAQGEYIAPEKIENVYAKCKFVSQCFVYGDSFNSYLVAVVSVDQDVLKAWA
TSEGIKYEGLAQLCSDPRTRAAVLADMDDVGKQAQLRGFEFVKAVTLVMEPFSLENGLLT
PTFKIKRPQAKAYFAKAIADMYAELVNSDSLHQKPK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgctgcccaacgccggctgcgagccatctccggtcatctcatcgcctctagc
gatccggataagacttctaaccttagcatcaacaccacagtcggcgagttcgtgctcgca
cagggttacagtgttgtttttcctgagaaattgcaaactgggaaatggaatgtttataga
tccgcaagatccccactgaagctagtttctaggtttgcagagcatcctgatatcgcaaca
ctgcatgataattttgaacatgctgtagagacctttcgaaattacaaatacctgggtaca
aggattcgtatggatggaacagttggggaatacaagtggatgacctatggagaagccggc
acctctcggtcagcagtaggatctggccttatttatcatggaataccaaggggtgcatgc
ataggactctattttataaacagaccagagtggattattttggatcatgcctgctcagca
tattcttatatatctgtgcctctttatgatacattgggaccagatgcggtgcaatatata
gttaatcatgcatcagttgaagtcattttttgtgtaccccaaacactgagcactctactt
atcttcttatctcagatgtcatctgttcgtttaatagtggttgttggtggaatagatgag
aagatgccctcaatttcttcagcaacttcagtgaagattattacttattcaaaactgatt
agtgaagggcaaagtaatattcagagatattgcccaccaaaacctgaagatgttgcaact
atctgctataccagtggtacaactgggacacctaagggagttgtacttactcatggaaac
ttgattgcaaatgctgctggatctagtatgagtgtcaagttctacccctcagatgtgtat
atatcatatcttcctttggcccatatttatgagcgtgttaaccaaattatggtgacatat
tttggagttgcagttggtttctatcagggggataatttgaaactgatggaggatatggaa
gctctaaggcctaccctgttttctagtgtccctcgattatacaacagaatttatgatggt
gtgatgaatgcggtgaagacatctggtggcttgcgagagaggatatttaatgcaggctac
aatgccaagatgcaagcaatagcaaatggaaagagcccgtcaccaatttgggatagacta
gtatttaacaaaattagagaaaaacttggaggccgtgtccgattcatgacttcaggtgcc
tctccattgtcggcagatgttatggacttcctaagagtctgctttgttggtttagttctt
gaaggctatgggatgacagagacatcttgtgtcataagtggaatggatgtgggcgacaat
ttaactggtcatgttggttctccaaatcctgcttgtgagatcaagcttgaagatgttcct
gaaatgaattatacatctgatgatcaaccgtatccccgtggagaaatttgtgtaagaggt
ccaatcgtgtttcaaggctattacaaggacgaagtgcagaccaaggaggtaatggatgag
gatggatggcttcacacaggagacataggattatggttacctggaggacgtttaaagatc
attgacaggaaaaagaacatttttaagttggctcagggtgagtacatcgccccagaaaag
atagagaatgtatatgccaaatgcaaatttgtgtctcaatgctttgtctacggtgatagc
ttcaattcctatctagttgcagtagtttcagtggatcaagatgtattaaaagcttgggct
acatcagaaggaataaagtatgaaggtctagcccagctctgcagcgacccacggacaagg
gccgcggtccttgctgacatggatgacgttggaaagcaggctcagctgagaggttttgaa
tttgtgaaagctgtcactttagttatggagcccttttctttagaaaatggtctacttacc
ccaacattcaagataaagagacctcaagcaaaggcgtattttgccaaggcgatagcagat
atgtacgccgagttagttaattctgattcgttacatcagaaaccaaaataa
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