Zingiber officinale (ginger): 122012439
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Entry
122012439 CDS
T08725
Name
(RefSeq) RNA cytidine acetyltransferase 1-like
KO
K14521
N-acetyltransferase 10 [EC:2.3.1.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122012439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122012439
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
Other 90S particles
122012439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNAT_acetyltr_2
tRNA_bind_2
TmcA_N
Helicase_RecD
AAA_22
DEAD
AAA_30
MMADHC
Motif
Other DBs
NCBI-GeneID:
122012439
NCBI-ProteinID:
XP_042424916
LinkDB
All DBs
Position
8A:complement(11403876..11417068)
Genome browser
AA seq
1029 aa
AA seq
DB search
MRKKVDDRIRTLIENGVKLRHRSMLIIVGDKSRDQIVNLHYMLSKAVVKSRPTVLWCYKD
KLELSSHKKKRSKQIKKLLQRGLLDPEKVDPFSLFVESGNLTYCLYRDSERILGNTFGMC
ILQDFEALTPNLLARTIETVEGGGLVILLLRSLSSLTSLYTIVMDVHERFRTESHSHAVA
RFNERFLLSVASCKACVVMDDELNILPISSHTRSVQPVSIMEDAEGLSERERELKNLKDQ
FHDDFPVGPLIGKCCTMDQGKAVVTFLDAILDKTLRSTVALIAARGRGKSAALGLAIAGA
VAAGYSNIFVTAPSPENLKTLFDFVCKGINALEYKEHLHYTVTKSDEPDLKKSTVKIDIY
KQHRQTIQYLRPQDHGKLSQVELLVIDEAAAIPLPVVKSLLGPYLVFLSSTVNGYEGTGR
SLSLKLLQQLESQSQMSAQNGDESHTGRLFKKIELHESIRYATGDPIESWLNELLCLDVA
NYIPNITRLPHPSECDLYYVNRDTLFSYHKESEIFLQRMMALYVASHYKNSPNDLQLMAD
APSHHLFVLLGPVDESKNTLPDILCVVQVCLEGQISRKSAIKSLSEGRQPFGDQIPWKFC
EQFQDNVFPTLSGVRIVRIAVHPSALRLGYGSTAVELLSRYYEGQLTHFAEEDVEPAEDS
EVKVTEVAEKVSLLEEKIVPRTNLPPLLVHLHERHPEKLHFMGVSFGLTLDLFRFWRKHN
FFPFYIGHIPSAVTGEHTCMLVKPFNNDDIEVNESNEHGFFEPFYQDFRQRFLRLLSTTF
QKLDYKLSMSILASKIHFAEHEHDLPISNGCINGLEELLSPHDMKRLEAYTNNCVDYHMI
LDLLPILARKYFQEKIPVTLSPVQASVLFCLGLQNKDVGDIKEEMKLEREQILSLFIKVM
KKFYNYLYKTATKETDETLPRLKIDMAPHIKSVDEELNEAAKEVREKMKAESDVVLDPEY
LQQYAIADEEGEFDKALENGTKVSSSGILSVKSNRKWNAHSDHTSDKRDKGKRKGKHGDK
SRSNKKKRI
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagaaggtggacgaccgtatccgcacgctaatcgagaatggggtcaaactcagg
catcgttccatgttgataattgtgggagacaagtcccgtgatcagattgtgaacctgcat
tatatgctaagcaaggcagttgtgaagtcacgcccgacagtgctttggtgttacaaagat
aagcttgagctaagcagtcataagaaaaagcgctcaaagcagataaagaagctgctgcaa
aggggattgcttgatcctgagaaagtggatcctttttctctttttgttgaaagtggaaat
ttaacatattgcttgtatagagattcagaaagaattcttggaaatacatttgggatgtgc
attttacaggactttgaggcattgacgcccaatcttctagcaaggactattgagacagtt
gagggcggtgggcttgtaattttgttgctccgttctctttcttctcttactagcctctac
accatcgtgatggatgtgcatgaaagattccgaacagagtctcattctcatgctgttgct
cgatttaatgaacgattccttttatctgttgcctcgtgtaaggcgtgtgttgtaatggat
gacgagcttaacattttgccaatatcctctcatacgagatcagttcaacctgtatcaata
atggaggatgctgaaggcttatcagaaagggagcgagaattaaagaacctcaaagatcaa
tttcatgatgattttcctgtgggcccactgattgggaagtgttgcacaatggaccaggga
aaagctgttgtcacatttcttgatgcaattctggacaaaacattacgcagtaccgttgcc
ttgattgctgcccgtggacgtggaaaatctgctgctctgggacttgctattgctggagct
gttgctgcaggatactcaaatatatttgtcactgcacctagcccagagaatcttaagaca
ttatttgactttgtttgcaaggggatcaatgcattagaatacaaggaacacctacactat
actgtgacgaagagcgacgaaccagatttgaagaaatcaacagttaagatagatatctac
aagcaacatcgccaaacaattcagtaccttagaccacaggaccatgggaaactttctcaa
gttgagctcctagttattgatgaagctgctgctattccactaccagttgtgaagtccttg
cttgggccttatcttgtctttctatcatcaactgtcaatggctatgaaggcactggtcgt
tctttatcattgaagctactccagcaattggaatcgcagagccaaatgagtgcacaaaat
ggtgacgaatctcatactggtaggcttttcaagaagattgaattgcacgagtctatcaga
tatgctactggggatccaattgaatcttggcttaatgaattactttgcttggatgttgca
aattacattccaaatatcactagacttccacatccaagtgaatgtgacctttactatgtc
aaccgagatacacttttctcatatcacaaggagagtgagatatttttacagcgcatgatg
gccctttatgttgcttctcactacaaaaattcacctaatgacttacaattgatggctgac
gcgccatcccatcacttgtttgtgttgcttggtccagttgatgaatcaaaaaatactctt
ccagatattttgtgtgttgttcaggtttgccttgaaggacaaatatcacgcaagtcggca
attaaaagtctaagtgaaggtcgccaaccttttggtgatcagataccttggaaattttgt
gaacaatttcaagacaatgtctttccaacactatctggagttagaattgtgaggattgca
gttcatccaagtgccttgaggctcggatatggctctactgcagtggaactattgtcaaga
tattatgaaggacaattgacacattttgctgaggaagatgttgaaccggctgaggactct
gaagtgaaagtcactgaagttgcagagaaggtgtccttgctagaagaaaaaattgtgcct
agaactaatcttccacctcttctggttcatcttcatgagcgacatccagaaaaacttcac
ttcatgggtgtgtcttttggacttacactcgaccttttccgcttttggagaaagcacaat
tttttcccattctacatcggtcacattccaagtgctgtcactggtgagcacacatgcatg
ttagtgaagccatttaacaatgatgatattgaagtcaatgagtcaaatgagcatggtttt
tttgagcctttctatcaggatttcaggcagcggtttttacgacttttgagtaccacattt
caaaaacttgattataagctctcaatgagcattttggcatcaaagatacattttgcagag
catgaacatgacttgcctatctctaatggttgcattaacggattggaggaattattgtcc
cctcatgatatgaaacgacttgaagcatacacaaataattgtgttgactatcatatgatt
ctagatctattgcccatccttgcgcgtaagtatttccaagagaagattcctgtcacgttg
tctcctgtccaagcttctgtgttattctgcttgggattgcagaacaaagatgttggagat
atcaaggaagaaatgaagctagaaagagagcaaatactatctttgttcattaaagtgatg
aagaagttttacaattatctttataagacagcaaccaaggaaactgatgagactcttccg
cgcctcaagattgacatggctcctcacatcaagtctgtggatgaagaactcaatgaggca
gccaaggaggttagggaaaaaatgaaggctgaaagtgatgtagttttggacccagaatac
ttgcagcaatatgctattgcagacgaagaaggggaatttgataaggctcttgaaaatgga
actaaggtttcatctagcggcatccttagtgttaaatctaataggaagtggaacgcccac
agcgatcatacatctgataagagggataagggcaagaggaaagggaaacatggtgacaaa
tcaagatcgaataaaaagaagagaatatag
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