KEGG   Zingiber officinale (ginger): 122012518
Entry
122012518         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122012518
   04120 Ubiquitin mediated proteolysis
    122012518
  09126 Chromosome
   03083 Polycomb repressive complex
    122012518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122012518
   04121 Ubiquitin system [BR:zof04121]
    122012518
   03036 Chromosome and associated proteins [BR:zof03036]
    122012518
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122012518
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122012518
   Cul7 complex
     122012518
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122012518
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122012518
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 122012518
NCBI-ProteinID: XP_042425016
LinkDB
Position
8A:12559099..12562507
AA seq 161 aa
MAKTITLRSSDGEVFEVDEVVAMESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKK
HVDATSAAASKSSDDASRLADEELKSWDGEFVKVDQATLFDLILAANYLNIKGLLDLTCQ
TVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 486 nt   +upstreamnt  +downstreamnt
atggcgaagacgatcacgctgaggagctccgacggtgaggtattcgaggtcgacgaggtg
gtcgctatggaatcgcagaccatcaagcacatgatcgaggacgactgcgccgacaacggc
atccctcttccaaacgtcacctccaagatcctttccaaagtcatcgagtattgcaaaaag
cacgtcgacgccacctcagccgctgcttcgaagtcatctgatgacgcctcccggctcgct
gacgaagaactcaagtcatgggatggagagtttgtcaaggtcgatcaggcgaccctattc
gatctcatactggctgcaaactacctgaatataaaagggcttctggatttgacttgtcaa
actgtggccgatatgataaagggaaagaccccagaagaaatccgcaaaacattcaacatc
aagaatgactttactccagaggaagaggaagaggtccgaagggagaatcaatgggccttc
gaatga

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