KEGG   Zingiber officinale (ginger): 122012521
Entry
122012521         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122012521
   04120 Ubiquitin mediated proteolysis
    122012521
  09126 Chromosome
   03083 Polycomb repressive complex
    122012521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122012521
   04121 Ubiquitin system [BR:zof04121]
    122012521
   03036 Chromosome and associated proteins [BR:zof03036]
    122012521
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122012521
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122012521
   Cul7 complex
     122012521
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122012521
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122012521
SSDB
Motif
Pfam: Skp1_POZ Skp1 TrbL_2
Other DBs
NCBI-GeneID: 122012521
NCBI-ProteinID: XP_042425018
LinkDB
Position
8A:12580838..12596897
AA seq 288 aa
MAKTITLRSSDGEVFEVDEAVAMVSPIIKHVIEDCPDNTIPLPNVTSKILPAVIEYCKKH
VDASSDGDSRLADEELKSWDAKFVKVNKATLFQLCLAADYLYIKGLLDLTYQTVADKMKG
MTLEEIRFKKVVTLRSSDGELFVVDEVVAMKSQTIKYLIEDDCADSAIPLPNVTSDILLQ
VIEYCEKHVDDDATTASNSSDDDSRLADEELKSWDAEFVKVDQATLFDLILAANYLNIKG
LLDLTCQTVVDMIKGKTPEEIRKTFNIKDDFTPEEEEEVRRENPWAFE
NT seq 867 nt   +upstreamnt  +downstreamnt
atggcgaagacgatcacgctgaggagctccgacggtgaggttttcgaggtagacgaggcg
gtcgccatggtatcgccaatcatcaagcacgtgatcgaggactgccccgacaacaccatc
cctcttccaaacgtcacctccaagatcctcccggcagtcatcgagtattgcaagaagcac
gtcgacgcgtcatctgatggcgactcacggctagctgacgaagaactcaaatcctgggat
gccaagtttgtcaaggtcaataaggcgaccctattccaactctgtctggctgcagattac
ctgtatataaaagggcttctggatttgacttaccaaactgtggccgataagatgaaggga
atgaccctcgaagaaatccgcttcaaaaaggttgttactctgaggagctccgacggtgag
ctattcgtggtcgacgaggtggttgccatgaaatcgcagaccatcaagtacttgatcgag
gacgactgcgccgacagcgccatccctcttccaaatgtcacctccgatatccttctccaa
gtcatcgagtattgcgagaagcacgtcgacgacgacgccaccactgcctcgaactcatct
gatgatgattcccggctcgctgacgaagaactcaagtcatgggatgccgagtttgtcaag
gtcgatcaggcgaccctattcgatctcatactggctgcaaactacctgaatataaaaggg
cttctggatttgacttgtcaaactgtggtcgatatgataaagggaaagaccccagaagaa
atccgcaaaacattcaacatcaaagatgactttactccagaagaagaggaagaggtccga
agggagaatccatgggccttcgaatga

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