Zingiber officinale (ginger): 122012574
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Entry
122012574 CDS
T08725
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122012574
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
122012574
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GFIT
Motif
Pfam:
UBA
UBA_7
Rhomboid
CUE
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
122012574
NCBI-ProteinID:
XP_042425092
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Position
8A:complement(13400324..13406037)
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AA seq
290 aa
AA seq
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MMHGGPSGFHNAPVTRALVISSAIITVTYGLRGRSRSIGLSYQDITQNHGLWKTVPSIFA
FSSSPELIIGLYLIYYFRVFERQIGSNKYSVFVLFSLVASTFFQIAGLGLLKDSQVLASG
PYGLIFAAFVPFYFDIPVTSRFRMLGLNFSNKSAIYFAGFQLVLSAWRRSFIPAICGLLT
GFLFRANIFCIRKLKFPKKLTSLFSWLFLSSPSSSPSSANIRRNAYISSMDHRVQRNYRS
VGNFMPEPPESSITTLVSMGFETNAARQALIQARNDINVATNILLEAQSR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacggaggaccatccggatttcacaatgcgccggtcacgcgtgccctagtgatc
tctagcgccatcatcaccgtaacatatggccttcgcggccgttctcgcagcatcggattg
tcgtatcaggatattactcagaaccatggtctttggaagactgttccatcaatatttgca
ttttcatcctctccagaactgataattggattgtatctgatatattatttcagagtcttt
gagaggcagataggttctaacaagtactcggtttttgttctgttcagtttagtagcttca
acatttttccaaattgcgggtttgggtctcctaaaagattctcaagttcttgcatctgga
ccttatggtcttatatttgccgcctttgtacctttttattttgacatccctgttacttca
cgattccgtatgcttggactgaacttcagtaacaagtcagccatatactttgctggtttt
cagcttgttttatctgcctggagaaggtcgtttataccagccatatgcggtcttcttact
ggttttcttttccgagccaatatattttgcatccgcaaactaaagttcccaaagaagtta
acgtcactattttcatggttatttttatcttctccaagttcatccccttcgagtgccaat
atcagaagaaatgcatatatatctagcatggaccatcgagttcagcggaactatcgatcg
gtgggaaattttatgccagaaccaccagagtcttcgattacgacattggtgtcaatgggc
tttgagaccaatgctgccaggcaggcactcattcaggctagaaacgacataaatgtagca
acaaacattctcctcgaagcccagtctcggtga
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