Zingiber officinale (ginger): 122012598
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Entry
122012598 CDS
T08725
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122012598
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122012598
NCBI-ProteinID:
XP_042425128
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Position
8A:complement(1481599..1484002)
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AA seq
616 aa
AA seq
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MPEAPKLPPPATLPRVEGDAAPEDHRKALEFIEDVTANADGVQRRVLLEILSQNAPAKYL
HRHGLSGRFASDPEAFKRLIPLVTYEEIQPDILRIAQGDTSHILCGRPISEFLTSSGTSG
GERKLMPTIEEELDRRSLLYSLLMPVMSQFVRGLDKGRGMYLLFVKSEARTPGGLVARPV
LTSYYKSRHFLNRPADPYNLYTSPNEAILCQDSYQSMYAQLLCGLLHRSDVLRVGAVFAS
GFIRAIRFLEKHWSRLCRDIRTGELDHEITDRAVREAVGRVLRPEAELADLIEAECSRKS
WQGIIPRLWPNTKYVDVIVTGAMAQYIPTLDFYSNGLPLTCTMYASSECYFGLNLQPLSK
PDDVAYTLIPTMAYFEFLPVPSASCCKSTDFDHRDLVDLVDVKLGQEYELVVTTFAGLYR
YRVGDVLRVAGFKNKAPQFKFIRRKNVALSIDSDKTDEVELHAAVSAAVSHLEPFGASLV
EYTSYADTRSIPGHYVLYWELREEPGTTTVPASVFEDCCLAVEERLNSVYRQGRVCDKSI
GPLEIRMVEEGTFDKMMDFALSQGASINQYKAPRCVRAGPVVELLDARVRSNFFSPKCPK
WAPGNKKWSKLLDAAN
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagcaccaaaactaccgccgccggccactctccctcgagtagaaggcgatgcc
gcacccgaggatcaccggaaggccctcgagttcatcgaggatgtgacggcaaacgccgac
ggagttcaacggcgcgtgctcctcgagatcctctcgcaaaacgctcccgccaagtatttg
caccggcacgggctgtccgggcgcttcgcctccgaccccgaggccttcaagcgcctcatc
ccgctcgtcacctacgaagaaatccaacccgacattctccgcatcgcccagggagacacc
tcccacatcctctgcggccgtccaatctcagaattcctcacaagctcgggaacatccggc
ggcgagcggaagttgatgccgacgatagaggaggagctggaccggcggtcgcttctatat
agcctgctaatgccggtgatgagccaattcgtgaggggcctcgacaagggcaggggaatg
tacctgctgttcgtgaagtcggaggcgcgcactcccggcggcctcgtcgcacgccccgtt
ctaacaagctactacaagagccgtcacttcctcaatcgccccgccgatccgtacaacttg
tacaccagccccaacgaggccatcctctgccaggactcctaccagagcatgtacgcccaa
ctcctctgcggcctcctccaccgatccgacgtcctccgcgtcggcgccgtcttcgcctcc
ggcttcatccgcgccatccgcttcctcgaaaagcactggtcgcgcctctgccgcgacatc
cgcaccggcgaactcgaccacgagatcacggaccgggcggtgcgagaagccgtggggcgc
gtgctgcgccctgaggctgagctggctgacctgatcgaggcggagtgcagcaggaaatcc
tggcaaggaatcattccaaggctgtggccaaacaccaagtacgtggacgtcatcgtcacc
ggcgccatggcccagtacatccccacgctcgacttctacagcaacggcctgccgctgacg
tgcaccatgtacgcctcctccgagtgctacttcggcctcaatttgcaacctttgagcaaa
cccgatgacgttgcctacaccttgatccccaccatggcctacttcgaattcctccccgtt
ccaagtgccagctgctgtaaaagtaccgactttgatcaccgagatttggtcgacttggtc
gacgtcaagctcgggcaagagtacgagctcgtcgtcaccactttcgctggtttgtaccgt
taccgcgtgggcgacgttctgagggtggcgggattcaagaacaaggcgccgcagttcaag
ttcatacggcggaagaacgtggcgctgagtatcgactcggacaagacggacgaggtggag
ctgcacgcggcggtgagcgccgcggtgagccacttggagccgttcggggcgtcgctggtg
gagtacacgagctacgcggacacgcgcagcatcccggggcactacgtgctttactgggaa
ttgcgggaggaaccggggaccacgactgtgccggcgtcagtattcgaggactgctgccta
gcggtggaagagaggctgaacagcgtgtaccggcaggggcgggtgtgcgacaagtcgata
gggccgctggaaatccggatggtggaggagggtaccttcgacaagatgatggacttcgcg
ctgagccagggagcgtccatcaaccagtacaaggcaccgaggtgcgtacgggcggggcca
gtagtggagcttctggacgcgagggtgcgctccaacttcttcagccccaagtgccccaag
tgggcgccgggcaacaagaagtggagcaagctcctcgacgctgcaaattga
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