Zingiber officinale (ginger): 122012599
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Entry
122012599 CDS
T08725
Name
(RefSeq) uncharacterized protein LOC122012599
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122012599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122012599
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
122012599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
122012599
NCBI-ProteinID:
XP_042425129
LinkDB
All DBs
Position
8A:complement(13902564..13906865)
Genome browser
AA seq
1284 aa
AA seq
DB search
MAILKDDSRVSRRDRKSSPVSRGSGSIQDTEEEACTRSAKVVSYASEISDVDSGMESDEF
DPAELGEPGTQLCQVGNQSFSVPLELYDLSALGTVLSLETWNECLSEDERFLLAEYLPDM
DQETFGRTLKELFSRENFHFGSPLDTLFIQLKGGLCDPRIVLYRRGSSFLQRHEYYHHLC
KYHNSMVRTLVRTKDAWRKCSGYAIEERLRLLNIPRSQRPLSYVGNDDVSCEMASESGDS
DNWHLNKRFKKDQQFVKPAFDIMPHKIDMTYQSVKDTKEYSKGVLKVAPSKVLAQECVGS
SHGYPSALKHGSKQNKFAGYDVKASKRTRDHISNDHDDREEEFVASQGDWAARNSHAVAR
TNMLISGKKQGQQKRYDTDSHNDEDPEIDNNFSQGCGGKWNSGQEITSYIHDSSEHTKAK
YFDRVWVYPSTRSDRKNKLIDSMQLNEIHEEAISLSHSAKSDRIGKEYRAGKSGAGHELK
NKSYKHSLVQMVNSPIQKDSRSRISQGRMKKNETQYENKGVTYLRDSSMISGSEETESDS
SEQVEDDRFPIATRKSNKLMKGDNKVYAGFPDVNKSGHTPESNSVKGKNGEPTKKALLQH
PSAKLRNAEKRHKAMADMHHSPEQSLYADDYGGGVMDEHKESLHGMPKSRGSKKLINKLV
NMMEVSDGPRIDAAQERSDMPLIGCNSLSKKSKLTVNAHLLSEQDESVHLQDSPNLQVDD
RVGTRKGKRKIDVETEMLNDINPDLVRSGKVSGDGEPKVKSQKKPFTIITPTIHTGFSFS
IVHLLSAIRKAMITPLIEDTARIASHLHDNSGPKIFTDGQHKVHQIATDIHILQSFENMG
KHSTGSGEDTGFLSLTVQEIVDRVRLNPGDPYILETQEPLTDLVRGVLKIFSSKTAPLGA
KGWKPFVSYEKSNKSWSWVGPIASSSHNDNGEEETLADAWGIPHKMLVKLVDTFANWLKS
SQITLQQIGSLPPPPASLLLNVDEKARFKDLRAQKSLNTINPSSDEVRAYFHREELLRYS
IPDRAFSYTAADGKKSIVAPLKRGGGKPTSKARDHFMLKPDRPPHVTILCLVRDAAARLP
GRIGTRADVCTLLRDSQYVVENISDAQVNQVVSGALDRLHYERDPCVQFDSERKLWVYLH
RDREEEDFEDDGTSSTKKWKRQRKDSLDQSDMGPVNDVDSAALVGGSGLDDEHNFNVLTS
PIRAGGIAEVSSEDVGLNIDNTNACIDSTTIKKDHDNWGGLGSNPLRERLVCQENSTDDF
DDGTFGQERPISLQYDLTMKNRLY
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttgaaagatgactctagggtttcgaggagggacagaaaatcctcacccgtg
agcagagggagcggttcgatccaggatacagaggaggaggcctgtacgaggagtgccaag
gtggtgtcttatgcttcggaaatttcagacgtggactccggcatggaatccgacgagttt
gatccggctgagcttggtgaaccgggaactcagttgtgtcaggtggggaaccagagtttt
agcgttcccctcgagctctacgacctctctgccttggggacagtgctgtccttggagacg
tggaatgaatgcctctcggaggacgagcgttttttgttggctgagtacctcccggatatg
gatcaggagacgtttgggcgcactctcaaagagctgttttcaagggaaaattttcacttt
gggagtccgcttgatactctattcattcagttgaaaggagggctctgtgatccgaggatt
gttctttaccgtcgaggttctagttttttacagcggcatgaatactaccatcacctgtgt
aaatatcataattctatggtaagaactcttgtccgcacaaaggatgcatggaggaagtgc
agtggatatgctattgaagaaagacttcggctacttaatatcccgaggagtcagaggcct
ttgagctatgttggaaatgatgatgttagttgtgagatggcttcagagagtggggattct
gataattggcatttgaataagcggtttaagaaagaccagcagtttgtgaagcctgcattt
gatatcatgccccataagattgacatgacttaccagtcagtaaaggacacaaaagagtac
tcaaagggtgtattaaaagttgccccttctaaggttttagcacaggaatgcgttggatca
tcacatggatatccttcagcattgaagcatggatcaaaacagaataaatttgctgggtat
gatgtgaaagcatccaaaagaactagagatcatattagcaatgaccatgatgatagggaa
gaagaatttgtggcttcacaaggggactgggctgcaagaaatagccatgcagtagccaga
actaatatgctgatatcaggaaagaaacaaggacaacaaaaaagatacgatacagacagt
cacaatgatgaagatcctgaaatcgataacaattttagccagggttgtgggggaaaatgg
aactcaggccaagaaataacttcttatattcatgattcttctgaacacaccaaagctaaa
tattttgacagagtttgggtgtatccttcaacccgcagtgaccgaaagaacaagctaatc
gattccatgcagctaaatgagatacatgaggaagccatttccttgagtcattcagctaaa
tcagataggattggcaaagaatacagggctggtaaatctggagctggtcatgaattaaaa
aataaatcttataaacattctttagtacagatggttaattcacctattcagaaggattct
agatccaggatatcacaagggaggatgaaaaaaaatgagactcagtatgagaataagggt
gtgacatatttgagagacagcagtatgatatctggaagtgaggagacagaatctgattca
tctgagcaggttgaggatgataggttcccgattgctactaggaagtcaaacaagctcatg
aaaggtgataacaaagtctatgctggcttccctgatgtgaataaaagtggacatacacca
gaatcaaattctgtgaaagggaagaatggagaacctacaaaaaaggcactattacagcac
ccaagtgcaaagctgagaaatgcagaaaagaggcataaagcaatggctgatatgcatcat
tctccagagcaatccttgtatgctgatgattatggtggtggggtgatggatgaacataag
gagagtttacatggtatgcccaagtcacgagggagcaagaaattaatcaacaagttagtg
aacatgatggaggtttctgatggtccaaggattgatgctgctcaagagagatcggatatg
ccccttataggttgtaactctttgtctaagaaatctaaactgacagttaatgctcatctc
ttgagcgagcaagatgaatctgtccacctacaggacagtccaaacctacaggttgatgac
cgtgttggtaccaggaagggtaaaaggaaaatagatgttgaaactgagatgctgaatgac
attaatccggatttggtaagatcagggaaggtttcaggagatggcgaacctaaagttaag
tcacagaagaaaccatttaccattatcaccccaactattcacacagggttttcattctct
attgtacatcttctttcagctataaggaaggcaatgattactcctcttattgaagatact
gcacggatagcctcccatcttcatgacaacagtggacctaaaatttttacagatggtcag
cacaaagtacatcaaatagcaactgacatacatattttgcaatcatttgagaatatgggc
aaacattccacaggatctggagaggatactgggtttctttctctcacagttcaagagatt
gttgatcgagttagattaaacccaggagatccatacattcttgaaacacaggaaccactt
actgatttagtccgaggagttctgaagattttttcatctaagacggcacctttgggggca
aagggttggaaacccttcgtatcatatgagaaatcaaacaaaagttggtcatgggtaggt
cctattgcttcttcctcacacaatgataatggagaagaagaaactttagcagatgcatgg
ggtattcctcacaagatgctggtaaagctggttgatacttttgctaattggcttaaaagt
agtcaaattacacttcagcagattggaagtctcccacctcctcctgcttcattacttttg
aacgtggatgagaaagcaaggttcaaagatctaagagcccaaaagagtctgaacactatt
aaccccagctctgatgaagtaagagcatattttcacagagaggaattgttacggtattct
attccagatagagccttttcctatacagctgctgatgggaaaaaatctattgttgctcca
ctaaaaaggggcggtggaaaaccaacctcaaaagctcgggatcatttcatgcttaagcct
gatcgaccaccacatgtgacaattctttgtcttgttcgagatgcagcagccagacttcct
ggtagaattggaactagagcagacgtttgtaccctattaagggactctcaatacgttgtt
gaaaacatctctgatgcacaagtgaaccaagttgtgagtggggctctagataggttgcat
tatgaacgtgatccttgtgtgcaatttgatagcgaaagaaaattgtgggtttatttacac
agggatagagaagaagaggattttgaggatgatggcacttcatccactaaaaaatggaaa
agacaaagaaaagattcacttgatcaatcagacatggggcccgttaatgatgtggatagt
gcagccttggttggtggctctgggttggatgatgaacataatttcaatgttctcacatca
ccaatcagagctgggggaatagctgaagtttcttctgaagatgttggtctaaatatagat
aatactaatgcttgtattgattctaccactataaaaaaggaccatgataattggggtggt
ctagggtcgaatccattgagggaaagattggtatgtcaggagaactctacagatgatttt
gatgatggaacatttggtcaagaacggccaattagtcttcaatatgaccttactatgaag
aatagattatactaa
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