Zingiber officinale (ginger): 122012701
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Entry
122012701 CDS
T08725
Name
(RefSeq) chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic-like
KO
K27711
chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122012701
Spliceosome [BR:
zof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122012701
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Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
DUF1057
Motif
Other DBs
NCBI-GeneID:
122012701
NCBI-ProteinID:
XP_042425262
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Position
8A:15703330..15706936
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AA seq
261 aa
AA seq
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MASLAGLSSATAASSPSSSLPLRSPIPCEATTRRRHLLLPSRCNRFRRAVASLPDPNERT
NPEYTPWLIAGLGNPGNKYHGTRHNVGFEMIDHISRAEGITLNSIQSKALIGIGSIGEVP
ILLVKPQSYMNYSGESVGPLAAYYQVPLRHILLMYDEMSLPNGVLRVQRKGGHGHHNGVK
SVIHHLDDCRDFPRLCIGIGNPPGAMDMRAFLLQKFSNEERIQMDSALEQGVDAVRTLVF
KGFSENLHRFNLVQKYKYHKV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttggccggtctctcttctgccaccgccgcttcgtccccctcctcctccctt
cctctccgcagcccaatcccttgcgaagccacgacaagacggcggcaccttcttcttcct
agtcgctgcaatcgcttccgacgcgccgtcgcctcgcttccggaccccaatgagagaacc
aacccggagtacacgccgtggctaatcgccggtctcggaaaccccggaaacaagtaccac
ggaaccaggcacaacgtgggatttgagatgattgatcatatttctcgagctgaaggcatt
accttaaacagcatccaatccaaggcattgataggaattggttccatcggggaagtgcca
attctcttggtgaagccacaatcctacatgaactacagcggagaatcagtagggccactt
gctgcatattatcaagtgccattacggcatattttacttatgtatgacgaaatgagtttg
cccaatggtgttttgagggttcagcgaaaaggcggtcatggacatcacaatggtgtaaag
agtgtaattcatcatttagatgattgccgagacttccctcgactatgcattggtattggc
aatccacctggagctatggatatgagagcttttctactacagaaattcagtaacgaggag
cgcatacagatggattctgctctggagcaaggggtggatgctgtaaggactcttgtattc
aaaggtttcagtgaaaacctccatcgattcaacttggtgcagaaatacaagtaccacaaa
gtttga
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