Zingiber officinale (ginger): 122012766
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Entry
122012766 CDS
T08725
Name
(RefSeq) probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00740
Riboflavin metabolism
zof00790
Folate biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01240
Biosynthesis of cofactors
Module
zof_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
122012766
00790 Folate biosynthesis
122012766
Enzymes [BR:
zof01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
122012766
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
122012766
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Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
Motif
Other DBs
NCBI-GeneID:
122012766
NCBI-ProteinID:
XP_042425347
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Position
8A:complement(2513811..2516590)
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AA seq
505 aa
AA seq
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MDCLLLSPPFSPQAAVSSSCQRSFVGFHSLSYRLIKKGWSRLRCGSIGGAENGSAVGGLG
GAASSFGTLSAEITQETVDFFVSDAEGDPDQPSEGFCSIDQAVDALREGKFVIAVDGDEQ
DGENEGDLIMAATLANTKAVAFMIRHGSGIISVGMKEEDLERLMIPMMSPIITEIKDHSN
AAATITVDARITSTGVSAADRAQTILALASPDSKPEDFRRPGHVFPLKYRNGGVMNRAGH
TEASVDLAALAGLQPVSVLSTIVDPEDGSIAGLPALHTIAKEFNLPIISISDLIRYRRKR
EKLVEKIAVCRLPTKWGLFQAYCYQSKLDGTEHIAVVKGDIGDGQNVLVRVHSECLTGDI
LASARCDCGNQLDLALRLIEEEGRGVLVYLRGHEGRGIGLGHKLRAYNLQDQGHDTVEAN
LELGLAVDAREYGIGAQILRDVGVRTMRLMTNNPAKFIGLKGYGLAVVGRVPVISPITEE
NKRYLETKRTKMGHIYGSDLPESSP
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggattgcctgctgctcagccctcccttctcgcctcaagcggccgtcagctcaagctgc
caaagatccttcgttggcttccacagcctgagctatcggttaatcaagaagggctggtcg
agactccgatgcggttccatcggcggggcagaaaatggatccgccgttggaggacttggc
ggagcggcgagttcgttcggcactctgagcgctgaaataacgcaggaaacggtggacttc
tttgtgagcgacgccgaaggcgatccggatcagccttccgaaggcttctgctccattgat
caagctgtcgatgctctccgtgaaggaaagtttgtgattgctgtagatggcgatgaacaa
gacggtgagaacgaaggtgatcttatcatggcagctactctggcaaacaccaaggccgtt
gcctttatgattaggcatggttcaggaataatatccgtcggaatgaaggaagaagacctg
gagaggctcatgattcctatgatgtctcccatcatcactgaaataaaagatcattccaac
gcagctgccacaatcacagtggatgccaggataacctccaccggtgtgtcggctgctgac
cgagcgcaaactattcttgctcttgcttctcctgattccaagccagaggattttagaaga
cctggccatgtgtttcctctaaagtatagaaatggaggtgtaatgaacagagctggccat
actgaagcatcggtggatttggcggccctagctggacttcagcctgtgtcagttctctca
actatcgtcgatccagaggatggttcaattgcaggtctgcctgcattgcacacaatcgcc
aaggagttcaatttaccaataatctcaatcagtgatctgatcaggtatagaagaaagagg
gagaaacttgtggaaaaaattgctgtatgccgattgcctactaaatggggacttttccaa
gcttattgttaccagtccaaattagatggaactgagcacattgccgttgtgaagggagat
atcggagatggacaaaatgttctggtaagagtccactctgagtgtctaactggagacata
ctcgcatctgctcgctgcgattgcggcaatcaacttgatctcgcgcttcgactgatagag
gaagaaggaagaggagttctagtttacctccgcggccatgaaggaagaggcattggcctc
ggccataaactccgagcatacaatttgcaggatcaaggccatgatacggtggaagctaac
ttggaactaggcctggctgttgatgcccgtgaatatggaattggtgcccagattctaaga
gatgttggtgtgcgcacaatgcgattgatgaccaataatccggcaaaattcatcggactc
aaaggctatggactggctgttgtcggaagggtccctgtcatttctcctataactgaggaa
aataagagatatctggagacgaagagaaccaagatggggcacatctatggctcagatctt
cctgaaagttcaccctga
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