Zingiber officinale (ginger): 122012781
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Entry
122012781 CDS
T08725
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.8-like
KO
K14487
auxin responsive GH3 gene family
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122012781
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
122012781
NCBI-ProteinID:
XP_042425358
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Position
8A:complement(842700..845258)
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AA seq
610 aa
AA seq
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MAVLKATSPTAAATTKLGPAACEKDAEKLAFIEEMTANADQVQERVLAEILTQNSETEYL
RRYGLNGATDRVTFKSKITMVTYEDLQPEIQRIANGDRTAILSGHPISEFLTSSGTSAGE
RKLMPTIQAELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSESRTPGGLPARPVLT
SYYKSDHFRSRPFDPYNVYTSPTAAILCADAFQSMYAQMLCGLIDRLAVLRVGAVFASGL
LRAIRFLQLHWRDLAADISSGVLTPKVTDPAIREAVGDLLRPDATLAELIEAECAGGDWA
GIVKRIWPNTQYLDVIVTGAMAQYIPTLEYYGGGMPMACTMYASSECYFGLNLRPMCKPG
EVSYTIMPMMGYFEFLPHEEGSAVGGAALQQLVDLVDVEVGKQYELVVTTYAGLCRYRVG
DILQVTGFHNAAPEFRFVRRKNVLLSIESDKTDEAELQGAVERAAALLRPWGATVAEYTS
QADTKAIPGHYVIYWELLMKEGEGEGEGEGERGRLPPAETLRACCLEMEEAMNTVYRQSR
VADGSIGPLEIRVVRAGTFEELMDYSLSRGASINQYKVPRCVTFPPIIELLDSRVVEAHF
SPSCPKWAPH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctgaaggcgacgagcccgacggcggcggcgaccaccaagcttgggccggca
gcgtgcgagaaggatgcggagaagttagcgttcatcgaagagatgacggcgaacgccgac
caggtgcaagagagggtgctggcggagatcctgacgcaaaattccgaaacggagtatctg
cgacggtacggcctcaacggcgccaccgaccgcgtcacgttcaagtccaagattacgatg
gtcacgtacgaggacctccaaccggagatccagaggatcgccaacggggaccgcaccgcc
atcctctcgggccaccccatctcggaattcctaacgagttcggggacgtcggccggcgag
aggaagctgatgccgacaatccaagcagagttggaccggcggcaactcctctacagtctt
ctcatgcctgttatgaatctgtacgttccgggattggacaaggggaaggggctctacttc
ttgtttgtgaagtctgagagccggacgcccggcggcctgccggctcggccggtgctcaca
agctactacaagagcgaccacttccgttcgcggccgttcgacccctacaacgtctacacg
agccccaccgctgctatcctctgcgccgatgccttccagagcatgtacgcgcagatgctc
tgcggcctcatcgaccgcctagccgtcctccgcgtcggggccgtcttcgcctccggcctc
ctccgagccatccgcttcctccagctccactggcgcgacctcgccgccgacatctcttcc
ggcgtcctcacccccaaggtcaccgacccggccatccgtgaggcggtgggggatctcctg
aggcccgacgcgaccctcgcggagctcattgaggcggagtgcgcgggcggcgactgggcc
gggatcgtgaagcggatctggcccaatacccagtacctcgacgtgatcgtgacaggagcg
atggcgcagtatattccgactctagaatactacggcggcgggatgccgatggcgtgcacc
atgtacgcctcctcggaatgctatttcggactcaacctccggcctatgtgcaaaccgggc
gaggtttcttacaccatcatgcctatgatgggttacttcgagttcctcccccacgaggaa
ggttccgccgtcggtggcgcagcactgcagcagctcgtcgacctggtcgatgtcgaggtc
ggcaagcagtatgagctggtcgtcaccacctacgccggcctttgccgctaccgcgtcggc
gacattctccaggtgacggggtttcacaacgcggcgccggagttccggttcgtgcggcgg
aagaacgtgctgctgagcatcgagtcggacaaaacggacgaggcggagctgcagggggcg
gtggagcgggctgcagcgctgctgcggccgtggggggcgacagtggcggagtacacgagc
caggcggacacgaaggccatccctgggcactacgtcatctactgggagctactgatgaag
gaaggagaaggagaaggagaaggagaaggagaaagggggcggttgccaccggcggagacg
ctacgagcgtgctgcctggagatggaggaggcgatgaacactgtgtaccggcagagccgg
gtggcggacggctccatcgggccgctggagatcagggtggtgcgtgcaggcaccttcgag
gagctcatggactactccctctcccggggcgcctccattaaccagtacaaggtgccgcgc
tgcgtcaccttcccgcccatcatcgagctcttggactccagggttgtggaggcccacttc
agcccctcctgcccaaagtgggcccctcattaa
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