Zingiber officinale (ginger): 122012791
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Entry
122012791 CDS
T08725
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122012791
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122012791
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_28
RsgA_GTPase
AAA_22
AAA_15
AAA_24
AAA_30
Motif
Other DBs
NCBI-GeneID:
122012791
NCBI-ProteinID:
XP_042425364
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Position
8A:complement(16830656..16834847)
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AA seq
595 aa
AA seq
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MVSDASKRKAAAKKAAAAAKRGGKPAVASSKTSEVTNGIAKVADGVGAFQISDRTCTGVL
ASHPQSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELP
IPEHMDIYHLSREIEASDMSALEAVICCDEERLRLEKEAEILAAEDGGGGEALDRIYERL
EALDALTAEKRAAEILYGLGFNKQMQTKKTRDFSGGWRMRIALARALFMNPTILLLDEPT
NHLDLEACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQT
RSELEENQMKQYKWEQDQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVV
RDKVLVFRFTDVGKLPPPVLQFVGVTFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKS
TLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDLDMSALQYMMMEYPGNEEEKMRA
AIGKFGLSGKAQVMPMKHLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEA
LNEWDGGLVLVSHDFRLINQVAEEIWVCENQAATRWEGDIMGFKEHLRSKTEFAD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggacgcgagcaagaggaaggcggcggccaagaaagccgcagccgcagcgaag
aggggtgggaagcctgccgtggcgtcgtcgaagacgtctgaggtgaccaacgggattgcg
aaggttgctgatggagtgggggccttccagatctcagatcggacttgcactggagtactt
gcttcgcatccccaatccagagatatacatattgagtccttgtcattaacctttcatggg
catgacctgatagtagattctgagttggagctcaactatggaaggcgctatggtttgtta
ggacttaatggttgcgggaagtcaactcttctgacagctattggatgcagagagctaccc
atccctgagcacatggatatatatcaccttagcagggaaattgaagcttctgatatgtct
gctctggaggctgtcatctgctgtgatgaagaaagattgaggttggagaaagaagctgaa
atattagccgccgaggatggcggtggtggagaagctttggatcgcatctatgagcgattg
gaagctcttgatgcattgaccgctgaaaagcgagctgctgaaattttgtatggtcttggt
tttaataaacaaatgcaaacaaagaaaacccgagacttctctggtggttggcgtatgagg
attgcattagctagagccctctttatgaatccaacaatacttttacttgatgaaccaaca
aatcatcttgatttggaagcatgtgtttggttggaagagactctaaagaagttcgaccga
atcctagttgtggtgtcacactcccaggattttctcaatggagtatgtaccaacatcata
cacatgcagaacaagaagcttaagctgtacactggtaattacgatcaatatgtccaaacc
cgctcagagctggaagaaaatcagatgaagcagtacaaatgggagcaggatcaaatttct
tcaatgaaagagtacattgctcgttttggacatggttctgcaaaactggctcgtcaagct
cagagcaaggagaaaacccttgctaagatggagcgtggcggacttacagagaaagtggtg
agggacaaagtgttggtctttcgcttcacagatgttggtaaactacccccaccagtccta
cagtttgttggcgtgacttttggctacactccagacaatctcatctacaaaaacctagat
tttggggtggatctagattcaagaattgccctcgtagggcctaatggtgctggcaagagc
acattgctcaagctaatgacgggtgatctcgttcctttagacggaatggtgcggcggcac
aatcatctcagaattgcacaatttcatcagcatcttgcagaaaagctggatctcgatatg
tcagccctccagtacatgatgatggaatacccaggcaatgaggaagagaaaatgagggct
gcgatagggaagtttggactgtcaggaaaagcacaggtgatgcccatgaaacacttgtcc
gatggtcagaggagcagggtaatttttgcctggctggcctggaggcaacctcatttgctg
ctgctcgatgaaccaacaaatcatctggatattgaaactattgattcattagctgaagca
ctgaacgagtgggacggtggcctagtcctggtgagccatgatttcagattgatcaaccag
gtggccgaggagatttgggtgtgcgagaatcaagctgccaccaggtgggagggtgacatt
atgggctttaaggagcaccttaggagcaagactgagttcgcggactaa
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