KEGG   Zingiber officinale (ginger): 122013494
Entry
122013494         CDS       T08725                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03083  Polycomb repressive complex
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122013494
   04120 Ubiquitin mediated proteolysis
    122013494
  09126 Chromosome
   03083 Polycomb repressive complex
    122013494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122013494
   04121 Ubiquitin system [BR:zof04121]
    122013494
   03036 Chromosome and associated proteins [BR:zof03036]
    122013494
Membrane trafficking [BR:zof04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    122013494
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     122013494
   Cul7 complex
     122013494
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     122013494
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     122013494
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 122013494
NCBI-ProteinID: XP_042425706
LinkDB
Position
8B:10541678..10549926
AA seq 288 aa
MAKTITLRSSDGEVFEVDEAVATVSQIIKHVIEDCPDNTIPLPNVTSKILPEVIEYCKKH
VDSSSDGDSRLADEELKSWDAKFVKVNKAILFQLCLAADYLYIKGLLDLTFQTVADKTKG
MTLEEIRFKKVVTLRSSDGELFVVDEVVAMKSQTIKNLIEDDCADSAIPLPNVTSDILLQ
VIEYCEKHVDDDATTASNSSDDDSRLAEEELKSWDAEFVKVDQATLFDLILAANYLNIKG
LLDLTCQTVVDMIKGKTPEEIRKTFNIKDDFTPEEEEEVRRENPWAFE
NT seq 867 nt   +upstreamnt  +downstreamnt
atggcgaagacgatcacgctgaggagctccgatggtgaggttttcgaggtcgacgaggcg
gtcgccacggtatcgcagatcatcaagcacgtgatcgaggactgccccgacaacaccatc
cctcttccaaacgtcacctccaagatcctcccggaagtcatcgagtattgcaagaagcac
gtcgactcgtcatctgatggcgactcacggctagctgacgaagaactcaagtcctgggat
gccaagtttgtcaaggtcaataaggcgatcctattccaactctgtctggctgcagattac
ctgtatataaaagggcttctggatttgactttccaaactgtggccgataagacgaaggga
atgaccctcgaagaaatccgcttcaaaaaggttgttactctgaggagctccgacggtgag
ctattcgtggtcgacgaggtggttgccatgaaatcgcagaccatcaagaacttgatcgag
gacgactgcgccgacagcgccatccctcttccaaatgtcacctccgatatccttctccaa
gtcatcgagtattgcgagaagcacgtcgacgacgacgccaccactgcctcgaactcatct
gatgatgattcgcggctcgctgaggaagaactcaagtcatgggatgccgagtttgtcaag
gtcgatcaggcgaccctattcgatctcatactggctgcaaactacctgaatataaaaggg
cttctggatttgacttgtcaaactgtggtcgatatgataaagggaaagaccccagaagaa
atccgcaaaacattcaacatcaaagatgactttactccagaagaagaggaagaggtccga
agggagaatccatgggccttcgaatga

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