Zingiber officinale (ginger): 122013532
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Entry
122013532 CDS
T08725
Name
(RefSeq) transcription factor MYB80-like
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122013532
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122013532
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
122013532
NCBI-ProteinID:
XP_042425736
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Position
8B:complement(13883461..13884482)
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AA seq
288 aa
AA seq
DB search
MGRIPCCERESVRRGQWTPEEDTKLASYIQQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY
LRPDLKRGEFSESEEQTIVKLHGVLGNRWSMIAGQLPGRTDNDVKNHWNTKLKKKLTGMG
IDPVTHKPFSHLIAEIATALDPPQVVHLAEAALGSFKDEMLHLLAKKSPASTTCFSLASG
VNNIGDEKVIELSSCDKVWIEAMVDGCEPPSSNGMQLSGLVDDDLGGGSAWSTDAGGGRR
CGIVGLNGKIEEEGVGEKFAGREGAGAGVLGSDCVPWDLPCDLMLMHP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggggaggattccttgttgcgagagggagagcgtgaggcgaggacagtggacgccggag
gaagacaccaagctcgcctcctacatccaacaacacggcactcgcaattggcgtctaatt
ccgaagaacgctggattgcaaagatgtggaaagagctgtcgactccggtggacaaactac
cttcgcccggacctcaagcgcggcgagttctcggagtccgaggaacaaaccatagtgaaa
ctgcatggcgtcctgggaaacaggtggtcgatgatagcagggcagctgccggggcgcacg
gacaacgacgtgaagaatcactggaacaccaagttgaagaagaagctgacggggatgggc
atcgaccccgtcactcacaagccattctcccatctcatcgccgagatcgccaccgcgctc
gatcccccgcaggttgttcacctcgccgaggccgccctcggctccttcaaggacgagatg
ctccatctgctcgccaaaaagagccctgcttcaactacgtgcttcagtttagcttccggt
gttaataatattggggacgaaaaagttattgaactaagctcctgcgacaaggtctggatc
gaggccatggtggatggctgtgaaccgccgtcgtcgaatggaatgcagctgtccggcttg
gtcgacgacgacttggggggagggtccgcgtggagcaccgacgccggtgggggcagacgg
tgtggcattgtgggactgaacggaaaaattgaggaggagggagtgggagaaaaatttgca
ggaagagaaggcgccggtgccggcgtgttgggatccgactgcgttccctgggatttgcct
tgtgatttgatgttgatgcatccttaa
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