Zingiber officinale (ginger): 122013818
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Entry
122013818 CDS
T08725
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122013818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122013818
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122013818
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
122013818
NCBI-ProteinID:
XP_042425977
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Position
8B:complement(52302833..52331115)
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AA seq
480 aa
AA seq
DB search
MPTMDISKSISGIKPPFSFPLKHEGSCTQVAFEQTTGLVAVSTEDYCVQFYSLFDNHEVS
EVQVCKRNFQPADDVMLYVALVAISLDGSLMATIDVTIPEEKLGGLVCLKYWTRGSLVAE
YLLSTVIYEPHSDAQVSSLAFRPGHNMAVTSSYGGDFKVWVHGSHADRNNESIQRTGWRC
QSVGSYKGKSLTAAAFSADGSVLAIAAETIITLWDPDSNILVAMIGDTLSPITKPSFVGE
SEYLVSYTHGLKPQLSVWSTSNLALYWSHGIVTEAVSCSHDESQFAVLALLSSAGDADAK
GNGVVTIPWLACRIVYAYIALLTLDWILVSASLDLWLTSAYPESRPVRLSLLLLILSPDL
YVSGVQLLLSVILREGFLHFFGLSLVPAVIGAPFEAAMFRAYSKGSSRRPSHLLQAVGDE
VEKGLAASSATSSHETAKEPSASSTPLLLPVSPSEAIPTALEPIEEERAPSPPPDKRLRL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaatggatatctcaaaatccatatcgggaatcaagcctcctttttcgtttcct
ctcaaacatgaaggatcctgcacacaagttgcatttgagcagacaactggattagttgct
gtttccactgaagattattgtgtacaattctatagcttgtttgacaaccatgaggtttca
gaggtccaagtgtgcaaaagaaattttcagcctgcagatgacgttatgctatatgtggct
cttgtagccatttctcttgatggctccttaatggctaccattgatgtgacaattcctgaa
gaaaaattagggggtttggtttgtctaaaatactggactcgtggttccctagtggcagag
tacttattatccactgtcatatatgagcctcacagtgatgctcaagtttcatctcttgca
tttcgccctggacacaacatggctgtcacatcatcttatggtggtgattttaaggtttgg
gttcatggttctcatgccgacagaaataatgaatcaatccagagaactggttggagatgc
caatctgttggttcatacaagggaaaatcattaacagctgctgctttttctgccgatgga
tcagtccttgctattgcagctgagactataattacattatgggatccagattccaatatt
cttgtggctatgattggagatacactttcgccaattacaaagccttcatttgttggggaa
tcagaatatctggtgtcctatacacacggtttaaagccacaactttcagtttggagtact
tcaaatttggcattgtactggtctcacgggattgttacagaagccgtaagctgttcccat
gatgaatctcaattcgccgtcttagctcttctcagttcagcaggtgatgctgatgcaaaa
ggaaatggggttgttacgattccttggcttgcttgtcgtatagtgtacgcctacatcgct
ctgttaaccctggactggatccttgtatctgccagtctcgacttgtggcttacttccgct
tatcctgaatcccgacctgtacgcctcagcctgcttctgcttatcctgagtcccgacctg
tacgtctcaggagtacaacttctcctctctgttatattgcgagaaggttttttgcacttc
ttcggactcagcctggtcccggcagttataggagccccttttgaggctgctatgttccgg
gcctactcgaagggatcatcccgacggcccagtcatcttttgcaggctgtgggtgatgag
gttgagaagggcctggctgcctcttcggctacttcttctcatgaaactgcgaaggaaccc
tcagcatcctccaccccgctgcttctgccggtgagcccttctgaggctatccctacagct
ttggagcccatcgaggaagagagggctccctctccgcctccagacaaacgcctgcgactc
tag
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