Zingiber officinale (ginger): 122014234
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Entry
122014234 CDS
T08725
Name
(RefSeq) EH domain-containing protein 1-like
KO
K12483
EH domain-containing protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122014234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122014234
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122014234
Membrane trafficking [BR:
zof04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122014234
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122014234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EHD_N
Dynamin_N
EH
EF-hand_7
EF-hand_1
MMR_HSR1
EF-hand_6
GTP_EFTU
EF-hand_8
EF-hand_5
TsaE
DUF5388
Motif
Other DBs
NCBI-GeneID:
122014234
NCBI-ProteinID:
XP_042426341
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Position
8B:35935545..35944441
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AA seq
544 aa
AA seq
DB search
MDIDSLPMRKHHAKIYQEWFSLADSDGDGRITGNDAIAFFAMSNLSRADLKQVWAIADSK
RRGYLGFKEFVSAMQLVALAQAGSEINQNTLSNADLDKLNPPLMEGLENLLCRNKASPVK
NEPEPEPSVNIQTQKPTLQWFGSKSAKTLLPLSSVTSIVDGLKRLYLEKLKPLEVTYRFN
DFACPLLTNSDFDAKPMIMLLGQYSTGKTTFIKHLLKSSYPGAHIGPEPTTDRFVVIMSG
PDERTVPGNTIAVQADMPFNGLTTFGSAFLSKFECSQMPNSLLEHLAFVDTPGVLSGEKQ
RTQRSYDFTGVTSWFASKCDLILLLFDPHKLDISDEFKRVIASLRGHDDKIRVVLNKADQ
VDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPINEAAVGPLGKELFEKEQDDLL
SDLKDIPKKACDRKINEFVKRARAAKIHAYVISHLKNEMPAMLGKAKAQQKLIDNLEDQF
AKVQREYHLPAGDFPDVEHFKEVLSGYSIDKFEKLKPKMVQAVDDMLAHDIPQLLKTFRN
PYER
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgattccttaccgatgaggaaacatcacgccaagatctaccaggaatggttc
tccctcgcggattcagacggggatggacgcatcacgggaaatgacgccatcgccttcttc
gccatgtccaatttgtctcgcgccgatcttaagcaggtatgggccattgcagactctaaa
cggcgaggttatctgggcttcaaagagtttgtttcagcaatgcagcttgtggcgttagca
caagcaggcagtgagattaaccaaaatacactttctaatgcggatttggacaaattgaat
cctccacttatggaaggcctagaaaatttactttgtagaaataaggcttcaccagtgaaa
aatgaacctgaacctgagccatcggtgaatattcagacacaaaaaccaacattgcagtgg
ttcggctctaaatcagcaaaaacgttgttaccattgagctcagttacttcaattgttgat
ggattgaagaggctatacctcgaaaagctgaaacctcttgaagttacctatcgtttcaat
gattttgcctgtcctttgttgacaaacagtgattttgatgctaagcccatgatcatgctc
ctgggccaatattccactggaaaaacaacattcattaaacatttactgaagtcaagttat
ccaggtgctcatatcggtccagaaccaaccactgaccgttttgttgtgataatgtccgga
cctgatgaaaggactgttcctgggaatactattgctgtacaagcggatatgcctttcaat
ggtcttacaacgtttggatctgcatttttatcaaagtttgagtgctcacaaatgccaaat
tcgctgctggaacacttagcgtttgtcgatactcctggcgtactttctggagaaaaacaa
cgaactcaacgcagttatgacttcaccggtgttacttcatggttcgcatcgaaatgtgat
cttattcttcttttgttcgatccacataagctcgacatcagtgatgagttcaaacgtgtt
attgcctctcttcgtggccatgacgacaaaatacgtgtggtcctgaataaagcggaccaa
gttgacactcaacagcttatgagagtttatggtgcattgatgtggtcactcggaaaagtt
ctaaatactcctgaagtaatgcgtgtatacatcggttcgttcaatgacaaacccataaac
gaggcagcggttggtccacttgggaaggagctgtttgaaaaagaacaggatgatctcctt
tctgatttgaaagatattcctaagaaggcttgtgatcgcaagatcaatgaattcgttaag
agagctagagcagcaaaaattcatgcttatgtcattagtcaccttaaaaatgagatgcca
gcgatgctaggcaaggcaaaggctcaacagaaactcattgataatcttgaggaccagttt
gctaaggttcagagggagtatcatctcccagctggggatttccccgacgtggagcacttt
aaagaagttttgagcggctacagtatcgataagtttgagaagctgaaacccaaaatggtg
caggctgtggacgatatgcttgctcatgacatcccccaattgctcaaaactttcaggaac
ccatacgaacgctga
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