Zingiber officinale (ginger): 122014433
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Entry
122014433 CDS
T08725
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04016
MAPK signaling pathway - plant
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122014433
04075 Plant hormone signal transduction
122014433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122014433
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122014433
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Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
PUMA_CC
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
122014433
NCBI-ProteinID:
XP_042426601
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Position
8B:41136476..41138350
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AA seq
553 aa
AA seq
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MSLWPPHDSASGMVPFLSSASTAAESRDVRWLRPAQPPVPVPSSSCSTSSSQTTMTSSAG
PHLIPENLQQRLHSLIEYAGETWTYAIFWQSSGGVSPVLSWGDGYYKGCEEDKRNGASTT
PEEKEHRKHVLRELNALISGSVDEGVDEEVTDTEWFFLVSMTQNFAAGASLPGQVLLAGS
PVWISGEYSMTVAPCERVRQARAFGLRTIACVPLGGGCGVVELGSTHEISQSPEILRKLR
YLFTHSGAVRPEAGSWPPAPPQAMELGFVAEPSMPWPPMAPKPSSRIEKPTTSGLTETLV
PIHMTQDLNFTASDCEALYIDKHTSFEGPKNSASTATPMPEEGNCGLFGGDSDQSDLEAS
VREVTSVAAATDPEKPRPKKRGRKPANGREVPLDHVEAERQRREKLNQRFYALRAVVPNV
SKMDKASLLADAVAYINELRIKAETLESEKKTLDSKLNRTNRESTTTAKDAAAEVEVKVL
GREAMIVVECDRRREAAARVMVALRELDVEVSYANVTVVKDLMILQATVEMTRRFYSQEQ
IKDALYVALFQPI
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttggccgccccacgacagcgcctccggcatggttccgtttctctcatccgct
tccaccgccgccgaaagccgcgacgtccgctggctgcggcctgcccaaccccccgtccct
gtcccgagctcttcctgctccacttcctcgtcgcagaccactatgacctcttccgcaggg
ccgcacttgatccccgagaacctgcagcagcgtctccactccctcatcgagtacgctggc
gagacctggacctacgccatcttctggcagtcctccggcggcgtttcccctgtcctcagc
tggggcgacgggtactacaaaggctgcgaggaggataagcggaatggcgcgtcgaccacg
ccggaggagaaggagcaccggaagcacgtgctccgggagctcaacgcactcatctccggc
agcgttgacgaaggggtggacgaagaggtcaccgacacggagtggttcttcctcgtgtcg
atgacccagaacttcgccgcaggcgccagcctccccgggcaggtcctcctcgccggctcg
ccggtgtggatctccggggaatattccatgacggtggcaccgtgcgagcgagtgcgccaa
gcgcgggctttcgggctgcgaacgattgcctgcgtccccctgggaggcggctgtggagtc
gtcgaacttggatctactcacgagatctctcagagcccggagatcctgaggaagttgagg
tatctcttcacccacagcggcgccgtgcgtccggaagctggatcttggcctccggcgcca
ccccaagcgatggagcttgggttcgtcgctgaaccctcaatgccttggccaccgatggca
ccaaagccctcgtcccgtatagagaaacccaccaccagtggcctcaccgaaaccctagtc
cccattcacatgactcaagatctcaatttcaccgcaagcgattgcgaagccctctacatc
gacaaacacacctctttcgaggggccgaagaactcggcgtcgacagcgacgccgatgccc
gaggagggcaattgcgggctcttcggcggagattctgaccaatcggacctcgaagcgtcg
gttcgcgaggtgacgagcgtggcagcggcgacagatccggagaaaccgcgcccgaagaag
cgaggccggaagccggccaacggccgcgaggtgccgctcgaccacgtggaagcggagcgg
cagcggcgggagaagctgaaccagcgcttctacgccctgcgtgccgtcgttcccaacgtg
tccaagatggacaaggcttctctgctcgccgacgccgtcgcctacatcaacgagctgcgg
atcaaagcggaaaccctcgaatcggagaagaaaacgctcgattcgaagctcaatagaacc
aacagagagtcgacgacgacggcaaaggacgcggcggccgaggtggaagtgaaggtgcta
gggcgggaggcgatgatcgtagtggagtgcgaccggcggcgcgaggcggcggcgcgggtg
atggtggcgctgagggagctggatgtggaggtgagctacgcgaacgtgacggtggtgaaa
gacctcatgatcctgcaagcgacggtggagatgacgcggcgattctactcgcaggagcag
atcaaggacgctctctacgtcgccctatttcagcccatctag
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