Zingiber officinale (ginger): 122014491
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Entry
122014491 CDS
T08725
Name
(RefSeq) ABC transporter F family member 1-like
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122014491
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
122014491
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_14
MMR_HSR1
AAA_28
RsgA_GTPase
AAA_15
AAA_22
AAA_24
AAA_30
Motif
Other DBs
NCBI-GeneID:
122014491
NCBI-ProteinID:
XP_042426659
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Position
8B:complement(14451147..14455363)
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AA seq
595 aa
AA seq
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MVSDASKRKAAAKKAAAAAKRGGKSAVTSSKTSEVTNGIAKVADGVGAFQISDRTCTGVL
ASHPQSRDIHIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELP
IPEHMDIYHLSREIEASDMSALEAVICCDEERLRLEKEAEILAAEDGGGGEALDRIYERL
EALDASTAEKRAAEILYGLGFNKQMQTKKTRDFSGGWRMRIALARALFMNPTILLLDEPT
NHLDLEACVWLEETLKKFDRILVVVSHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQT
RSELEENQMKQYKWEQDQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVV
RDKVLVFRFTDVGKLPPPVLQFVGVTFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKS
TLLKLMTGDLIPLDGMVRRHNHLRIAQFHQHLAEKLDLDMSALQYMMMEYPGNEEEKMRA
AIGKFGLSGKAQVMPMKHLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEA
LNEWDGGLVLVSHDFRLINQVAEEIWVCENQAATRWEGDIMGFKEHLRNKTEFAD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggtatcggacgcgagcaagaggaaggcggcggccaagaaagccgcagccgctgcgaag
aggggtgggaagtctgccgtgacgtcgtcgaagacgtctgaggtgaccaacgggattgcg
aaggttgctgatggagtgggggccttccagatctcagatcggacttgcactggagtactt
gcttcgcatccccaatccagagatatccatattgagtccttatcattaacctttcatggg
catgacctgatagtagattctgagttggagctcaactatggaaggcgctatggtttgtta
ggacttaatggttgcgggaagtcaactcttctgacagctattggatgcagagagctcccc
atccctgagcacatggatatatatcaccttagcagggaaattgaagcttctgatatgtct
gctctggaggctgtcatctgctgtgatgaagaaagattgaggttggagaaagaagctgaa
atattagccgccgaggatggcggtggtggagaagctttggatcgcatctatgagcgattg
gaagctcttgatgcatcgaccgctgaaaagcgagctgctgaaattttgtatggtcttggt
tttaataaacaaatgcaaacaaagaaaacccgagacttctctggtggttggcgtatgagg
attgcattagctagagccctctttatgaatccaacaatacttttgcttgatgaaccaaca
aatcatcttgatttggaagcatgtgtttggttggaagagactctaaagaagttcgaccga
atcctagttgtggtgtcacactcccaggattttctcaatggagtatgtaccaacatcata
cacatgcagaacaagaagcttaagctgtacactggtaattatgatcaatacgtccaaacc
cgctcagagctggaagaaaatcagatgaagcagtacaaatgggagcaggatcaaatttct
tcaatgaaagagtacattgctcgttttggacatggttctgcaaaactggctcgtcaagct
cagagcaaggagaaaacccttgctaagatggagcgtggcggacttacagagaaagtggtg
agggacaaagtgttggtctttcgcttcacagatgttggtaaactacccccaccagtccta
cagtttgttggcgtgacttttggctacactccagacaatctcatctacaaaaacctagat
tttggggtggatctagattcaagaattgccctcgtagggcctaatggtgctggcaagagc
acattgctcaagctaatgacgggtgatctcattcctttagacggaatggtgcggcggcac
aatcatctcagaattgcacaatttcatcagcatcttgcagaaaagctggatctcgatatg
tcagccctccagtacatgatgatggaatacccaggcaacgaggaagagaaaatgagggct
gcgatagggaagtttggactgtcaggaaaagcacaggtgatgcccatgaaacacttgtcg
gatggtcagaggagcagggtaatttttgcctggctggcctggaggcaacctcatttgctg
ctgctcgatgaaccaacaaatcatctggatattgaaactattgattcattagctgaagca
ctgaacgagtgggacggtggcctagttctggtgagccatgatttcagattgatcaaccag
gtggccgaggagatttgggtgtgcgagaatcaagctgccaccaggtgggagggtgacatt
atgggctttaaggagcaccttaggaacaagactgagttcgcggattaa
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