Zingiber officinale (ginger): 122014536
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Entry
122014536 CDS
T08725
Name
(RefSeq) nuclear pore complex protein NUP133-like isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122014536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122014536
03036 Chromosome and associated proteins [BR:
zof03036
]
122014536
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122014536
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122014536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
122014536
NCBI-ProteinID:
XP_042426713
LinkDB
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Position
8B:29324314..29336828
Genome browser
AA seq
1293 aa
AA seq
DB search
MFSPAARKPHLAGVTSQKGRNQQDSPSTPIEDARHSLIAPSVPGRPLTGTPAPWSSRLSV
LARFQSVKEANRTDTSKQIEPVYVGEFPQVVRNAQAHVLQKGFDNSCLAGGIDKGTSLSW
MICGTQLFIWSYLSDAAVPKNCIVLKIPSTVADMNFNVMDKPGRSWLVCVVNWDISSRKL
FEQCNSAGIILYNRQTGALAYWSDIYSESSHSPMVSLATQPLEESDRSMGLERFNSIIAT
AIPGNSQECLALACQATGGLWLFKFSLSGIHQEMISLNILNSNFNSSPVNARSLVWDPQH
AFSGESGLRFFVLTDHEIQYWNIVLAPSINVQKIWSHEIVGNDSQLGIKKDLAGQKQIWL
LDMQLDDRGKEFTILVATSCKDRVSSSNYIQYSLLLMQYSLGFSIKNSSFTNERILEKKA
LQVVIPKARVEDEAYLFSTRIRVGGKPSGSVVILAGDGTATVTSYWRGSTRLFQFDLPYD
GGKVLDASVFPSGEDNDEGAWIVLTEKAGVWAIPEKAILLGAVDPPERSLSRKGSSNERV
VDEEKRSQGTRGNTVAKKHSYEGWGPSDRQQAALVAKTAQDEEAEALLGRLFHEFLSSGE
VEDILDNLREKGAFLKEDETNVFTRISKSIIDTLAKHWTTTRGAEFVASSVVSSLLLDKQ
QKHQKYLHFLTLTKCHQELSSKQRSSTLIIMEHGEKLFSMIQLRELQNILGQSRKHLYDS
PSHVEASGSLWTLIQLVGEKARRNTVLLMDRDNMEVFYTKISDIEELFYCLSQHVEYIVG
RDQPFSIQVQRACEVSNACTTLIHAAMHYRDEHKNWYPSLEGLTPWNCQHVVRSGLWKIA
YSIMQLLKEVEAIDMPVVSEMWSQLERLTDVLLESYISAITAKIELGEEHQSLIVEYCSR
RDELLACLYELAKRLTQLKCLETHIGVDDLDRKEAIFREVTEPLLLIAKRHEAYQTLWQL
CYDLSDTRLLRSLMHESVGPKGGFSYFVFKQLLTSQQFSKLLRLGEEFQDELTIFLKEHK
DLLWLHEIFLNQFSAASETLHAVALSPDDSLHPTAEESPTETKRFLSLADRRRLLNLSKI
AAAAVSSVLIGKDMYFEMKARRIEADLQILKLQEEIISYLSDGVDVNDVDRPLLPGELIE
ICLKEGSKELCLKAFDVFAWTSSSFRNSNKSLLEKCWRAAVDQENWTLILASTVGCSDEV
TMESLRETVLYKASQRCYGPESLIYGGSFDEVLPLQKVDSESPNFGDSSLSVEDILKQHK
DFPDAGKLMLNAVLLAVIEDNVIVEEDIVMESR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgttctcccccgcggcgaggaagccgcatctcgccggcgtcacctctcagaagggacgg
aaccagcaggactccccgtctaccccgatcgaagatgcccgccattccctcatcgccccc
tccgtccccggccgaccgttaaccggcacgcccgcaccctggtcctctcgcctctccgta
ctcgccagatttcaaagtgtaaaagaagcaaataggacagatacatccaaacaaattgaa
ccagtttatgtgggagaatttcctcaggttgtacgtaatgcacaagcccatgttctgcaa
aagggtttcgataacagctgtcttgctggtggtattgataaaggaacatctctttcctgg
atgatatgcggcacccaactctttatatggagctatttgtctgatgctgctgttcccaaa
aattgtattgtgcttaagatcccatctacagtcgcagatatgaacttcaatgtcatggat
aaacctggtagaagttggttggtttgtgttgtcaattgggacatttcatccagaaaatta
tttgagcagtgtaattctgctggtatcatcctttataacagacaaactggagccttggca
tactggtctgacatctactctgaaagttcgcattctccaatggttagcttagctactcaa
ccattagaagagagtgatagatcaatgggactagaaagatttaactccatcattgctact
gcaatacctggtaattctcaagaatgtcttgctctagcttgtcaagcaacaggaggttta
tggctgttcaaattttcactatctggaatccaccaggaaatgatttcattaaatatttta
aacagtaattttaatagctctcctgtaaatgccaggtctttagtctgggatccacaacat
gctttctcaggtgaatcaggtctacggttctttgtgttgacagaccatgagattcaatat
tggaatattgttctcgcacctagcataaatgttcaaaagatatggagtcatgaaattgtt
ggtaatgatagtcagttgggtattaaaaaggatctagcaggacaaaagcagatttggctt
ctggatatgcaattagatgaccgtgggaaagaatttacaattcttgttgctacttcttgt
aaagatcgagtaagcagctcaaattatatacagtattctcttctattaatgcaatatagc
ctgggtttctctataaagaacagctcgtttacaaatgagagaattctagagaagaaagct
ctccaagtggtaattcctaaagcacgagttgaggacgaggcatatctattttctacaagg
atacgtgttggtggcaaaccatctggttctgtggtaatattagctggagatggaactgca
actgttaccagttattggagaggatccactcggctgttccagttcgatttaccctatgat
ggtgggaaagttcttgacgcttctgtttttccatctggagaggacaatgatgaaggggca
tggattgtcttaactgaaaaggcaggagtttgggcaatacctgaaaaggctattctactt
ggcgccgttgatcctccggaacgaagtttatctcggaaggggagttctaatgaaagggtt
gtagatgaagaaaaaagaagccagggaaccagaggcaacaccgtcgctaaaaagcatagt
tatgaagggtggggtcccagtgatagacaacaagcggctttagttgcaaaaactgctcag
gatgaagaagctgaagcactactaggtcgtctttttcatgaatttctttcatctggtgaa
gttgaagacatacttgacaatctcagagaaaaaggagcatttttaaaagaagatgaaaca
aatgtttttactcgcataagcaaatctattattgatacattagctaaacactggacaaca
acccgaggagctgaatttgtggcttcatctgttgtgtcatcacttcttttggataagcag
cagaagcatcagaagtatctccattttctcactttgaccaagtgtcatcaagaactatct
agtaagcagagatcttcaacgctaattattatggaacatggtgaaaagctttttagtatg
attcaattaagggaattacaaaatattcttggtcagagtcgaaaacacttgtatgattca
ccatcccatgtagaagcatctggttctctttggactctgattcagttagttggtgagaaa
gcacgaaggaatactgttcttcttatggatcgtgataatatggaagtattttacactaaa
atatctgatatagaagagctattttattgcttatctcaacatgttgagtacatagtgggt
agagatcaaccattcagtatacaggtgcaacgtgcttgtgaagtatcgaatgcctgcaca
actttgattcatgctgctatgcactacagagacgagcacaaaaactggtatccttctctt
gaaggattaacaccctggaactgccagcatgtagttcggtcaggcctctggaaaatagca
tattctattatgcagctcctaaaagaggtggaagctattgatatgcctgtggtgtcagaa
atgtggtcccagttagaaagactcactgatgtattgttggagtcttatatcagtgcaatt
acggctaaaattgaacttggagaagaacaccaatctctaatagttgagtactgtagcagg
agagatgagcttcttgcttgtctctatgagctagctaaaagattaacccaattgaagtgt
ctggagacacacataggcgttgatgatcttgacagaaaggaagccatatttagagaagtc
actgaacctctactcttgattgcaaagagacatgaagcttaccaaacattgtggcaacta
tgttatgaccttagtgataccagacttctccggagccttatgcatgagagtgttgggcca
aaaggagggttcagctattttgtctttaagcagctgctgacaagccaacagttctctaag
cttttgaggctcggagaagaattccaagatgagttaactatttttttgaaggaacataag
gatctactgtggctgcatgagatatttctgaaccaattttcagcagcttcagaaactctt
catgcggttgctctatccccagatgatagtttgcacccaacagctgaagaatcaccaact
gaaacaaagaggttcctgtcacttgctgacagaagacgtctacttaatctttccaaaatt
gctgcagctgcagtgtcttctgtgttgatagggaaggatatgtattttgagatgaaggcc
agacggatagaggctgatttgcaaattttaaaattgcaggaagaaatcattagctattta
tcagatggtgtagatgtaaatgacgtcgataggcctcttcttcctggagaactgatcgaa
atttgtttaaaagaagggagtaaagaactatgtttaaaagcgtttgacgtttttgcttgg
acaagttcatcatttcgaaactccaacaaaagccttttggagaaatgttggcgggctgcc
gtggaccaagaaaactggactcttattctggcatcaactgtcggttgtagtgatgaagtt
accatggagtcactgagagaaacagtgctatacaaagcttcgcagagatgttatggacct
gaatcactgatttatggtggtagttttgacgaagtactgcctttgcagaaagtggattca
gaatcgccaaattttggggactcttctttgtcagtggaagacattctcaaacagcacaaa
gactttcctgatgcaggcaaattgatgctgaatgctgtcctgcttgctgtgattgaagac
aatgtgatagtcgaagaggatatcgttatggaatctagatga
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integrated database retrieval system
