Zingiber officinale (ginger): 122014751
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Entry
122014751 CDS
T08725
Name
(RefSeq) putative disease resistance protein RGA4
Organism
zof
Zingiber officinale (ginger)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
Rx_N
LRR_4
AAA_16
LRR_8
NACHT
AAA_14
AAA_22
AAA
Motif
Other DBs
NCBI-GeneID:
122014751
NCBI-ProteinID:
XP_042427091
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All DBs
Position
1A:856374..861253
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AA seq
1298 aa
AA seq
DB search
MIGWFALTSLGWLAESFMAALVGKAVDRIVQQFGEQHGVEDDLEKLQDSLDHARLTISTI
ESLRIKDKGLQKKLKEFLTSLKDAAYDADDLLDEFQYRILKQQIEQQGNEAGNRASFSSY
STPPPSKKLKTSFSSYTSGLFGKGDDNNDDVRRIRKIKRRLDDNSVALEKIYSSLGVQDD
RGKKQLVSSASRQMSSFWTKPRLFGRDKELQELKDLLLEPEAVSGQSGFSVLSIVGIGGI
GKTTLAQEVFNDSSVKEYFELRIWVRVSENFSTEKLTREIIEYATKKNCNLPNFAALQDF
LKEKITPERFLLVLDDVWNEDRHQWESLCAPLRSGKPGSKILVTTRSRKIAGMVGDLDAI
HLEGLDEKCFWEFFKKCAFSSSNSGVHHYHLEAMAKKMIYKLKGLPLAAKTLGGLLSMKL
DEQHWKSILDSEIWQLPQEEENGIIPALQLSYQYLPPHLKQCFAFCSLFPKNYSFSESKL
ISIWIAEGFIVPQGSIRMEELGNNYFHELVNRSFFQKIKSKGFIKQFGMHDLIHDLTELI
SVGESSRIEKSNFHEIPNTIRHLSVHQEEEGMQTRCLTEFSHYNKLRTLMLPRRYSNNSL
LVDSSVLEKLKKIRVLILSKCALKELPDNIGKLIHIRYLDLSDNYDIRSLPESLCDLYNL
QTLILYRCYKLESLPHDMVKLINLRKLDGVAPMFFLKITEVGKLTSLQNLPVFKVLKDNG
YKLAELKGLKQLRGELRITNLENVENKGEANIANLKSKEHLDKLVLEWTSDSDVNLHISE
QVLEGLQPHNNLQSLTIREYNGARPPNWLDEQVYSRLEKLELQNCKRWNDLSVIGQLSQL
KRLYLGRTSVHTQNLHKLFDPIHCKFFFQLESLSLEGITMLEDLPNLGQLPCLEFLDIRS
LPGVKMIGDRFFSTSEEGSCFPSLHTLHFNEMPAWEEFYCSEDRDLFPCLIELQISDCQN
LRMLPPLSPSIELLQLSNVGLVDCPRFWKVIDESSNVTNSASITELFIQECPNLTILEQG
LLAHHLQQIDIQKCEQLLWAPVKRLKELTSLESLSIKECPKLMSMTQDEYINFELPPSIT
QLCLSDCGNLSKSLPGCLHNLTSLRDLEISNCPNLVSLPVEQLLNLESVTIKNCNELRSV
ERLQIKSLHNLKIAGCPKLLLSQGEAQTEKSALQMLEIDDTAFMKQSVIKNLLSSVNYLR
ISSSCEAVMFEGDDQESLQSLTSLDSLSFSDCKNLQSLPTKLYTLTSLQILGIHYCPQIQ
SLPEKGLPPSLTNLYFHGCHLALEQQLERHLAGIKKFG
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgattgggtggttcgcgctgacatccttgggatggctcgcggagagcttcatggctgcc
ttggtcgggaaggccgtcgatcgaatcgttcaacagttcggtgagcagcatggagttgaa
gatgacctcgagaagctacaggattctctcgatcatgccaggttgactatcagcaccatc
gagagcttgaggatcaaagataagggcctgcagaagaaattgaaggagtttctgacaagc
ctcaaggatgctgcttatgatgctgatgacttattggatgaattccaatacagaattctg
aagcagcaaatcgaacagcaaggaaatgaggctggtaaccgagcgtccttttcctcctac
tccactccccctccgagcaaaaagttaaaaacttcattttctagttacaccagtggcctc
ttcggaaaaggagatgataataatgatgatgtacggagaatcaggaaaataaagaggagg
ctagatgacaactcagttgctcttgagaaaatttacagttcgctaggcgtacaagatgat
agaggaaagaaacaattggtctcctcggcgagccggcaaatgagctccttttggaccaaa
cctcgattgtttggcagagacaaagagctgcaagaactcaaggatttgttgttagaacca
gaagctgtatctggccaaagtggattctctgttttgtctattgttggcattggagggata
gggaagaccactctggctcaagaagtcttcaatgacagtagcgtgaaagaatactttgag
ctcagaatttgggtccgtgtttctgaaaatttttcaacagaaaagttgaccagagagatt
atagagtatgcaaccaagaagaactgtaatctcccgaattttgctgctcttcaagacttt
ctcaaggagaagatcacgccagagaggtttcttcttgtattggacgatgtgtggaacgag
gacaggcaccaatgggagagtctctgtgcaccattgaggtctggaaagcccggcagcaag
atattggtaacaactcgctctaggaagattgctggcatggttggtgatttggatgccatt
catttggaaggtctggatgagaagtgcttctgggaatttttcaaaaaatgtgcatttagt
tcttcaaatagtggagttcatcattatcatttggaagccatggcaaagaagatgatttac
aagctaaagggattgccgcttgcagcaaagactctaggagggttgttgagcatgaaattg
gatgagcaacactggaaaagcattttagatagcgaaatatggcagcttcctcaagaagaa
gaaaatgggattataccagcgctacaactgagctatcaatatcttcctcctcatcttaag
caatgctttgcattttgctccttgtttcctaaaaattattccttttcagaatctaagttg
atcagtatttggatagcagaaggattcatagtgcctcaaggaagtatcagaatggaggag
ctaggaaacaactactttcatgagttagttaacaggtctttctttcaaaagataaagtct
aaaggatttattaaacaatttggaatgcatgacctcatccatgatcttacagagctcata
tctgtgggtgagtcttccaggattgaaaaaagcaatttccatgaaattcctaacacaatt
cgtcatctttcagtgcaccaagaggaagaaggtatgcaaacaagatgtttaacagaattc
tctcattacaataaattacgaacgctaatgttgccaagaagatacagtaacaatagtttg
cttgttgatagtagtgttttggaaaaattaaaaaagattcgtgttcttatcttgagtaaa
tgtgctttaaaagagctgcctgataatattggcaagttgatacatatccgttatcttgac
ttatctgacaattacgacattagaagcttgcctgagtccttatgtgacctatataatcta
cagacattgatattatatcgttgttataagttagaaagtctcccacatgacatggtaaag
ttgatcaatttgaggaaacttgatggagtagcacctatgttttttctcaagataacagag
gttgggaagcttacttctcttcagaatttgcctgtttttaaagtactaaaagataatgga
tacaaacttgctgaattaaagggtttgaaacaacttcggggagaactacgtataactaat
cttgagaatgtagaaaacaaaggcgaagcaaatattgctaatttgaagagtaaagagcac
ctcgataagttggtgctagaatggacatccgattcagacgttaatttgcacatatcagaa
caggtgcttgaaggtctccagccacataacaatctacaaagtttgacaattagagaatat
aatggtgctagacctcccaattggctagatgaacaagtatattctagattggaaaaactt
gaacttcaaaattgtaaaaggtggaatgatctatcagttattggacaattatcacaatta
aagcgcctctaccttgggagaacttcagtccatacccaaaatttacacaaattattcgat
ccaatacactgcaagtttttcttccaactagaatctttgtcactagagggcattaccatg
ttggaggatctcccaaatcttggacaacttccatgtctcgagtttcttgacattcggagt
ttgccgggagtgaaaatgataggcgatagattcttttccacatcagaagaaggcagttgc
tttcctagcctacatactctccatttcaatgaaatgccagcatgggaagagttctattgc
tccgaggatagagatctatttccctgcttgatagagcttcagatttcagattgccaaaat
ctgcggatgttacctcccctttctccttcaatagaattgctacaattaagtaatgttggg
ctggtagattgtccaagattctggaaagtaattgatgaaagtagcaacgtaactaattct
gcatctattacagagttgttcattcaagaatgtccaaatttgacaattctagaacaaggg
ttgctagcacaccatctacaacagattgatatacagaaatgtgaacaattgttgtgggca
ccagtcaaaaggttgaaagagctcacctctttagagtcattgtcaataaaagagtgcccg
aagctcatgagcatgacacaagatgagtacattaattttgagctcccgccatcaattaca
cagctatgtttgtctgattgtggaaatctttccaaatcactgcctggctgcctgcataac
ctgacctcattgcgtgacttggagataagcaattgtcccaatctagtttctttaccagta
gaacaattgcttaatttggaaagtgtaacaattaagaattgcaatgagttgagatcagta
gaaaggctccaaataaaatccctccacaacttgaagattgcaggatgtcccaagcttcta
ctttctcaaggagaggcacaaacagagaaatcggcactgcagatgttagagattgatgac
acagcgtttatgaaacaatctgtcataaaaaatttactatcatctgtaaactatcttaga
atttcatcctcttgtgaagcggtgatgtttgagggggatgatcaggagtcattgcaaagc
ttgacatctctcgattcattaagtttctctgactgcaagaatctacaatccttgccaaca
aagttgtacacccttacgtcccttcagattttggggatacattattgcccacaaattcaa
tctctgccggagaaggggttgcctccttccctcacgaatttatattttcatggttgtcat
ctggcactggagcagcagttggaaaggcacttggcggggattaagaagtttggttga
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integrated database retrieval system
